Lepisosteus oculatus (spotted gar): 102682644
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Entry
102682644 CDS
T07349
Symbol
tdg
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102682644 (tdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
loc03400
]
102682644 (tdg)
Enzymes [BR:
loc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
102682644 (tdg)
DNA repair and recombination proteins [BR:
loc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102682644 (tdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Hikeshi-like_C
Motif
Other DBs
NCBI-GeneID:
102682644
NCBI-ProteinID:
XP_006633153
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Position
LG8:212858..226606
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AA seq
334 aa
AA seq
DB search
MEEKQYASLTVPTEYLQHWWRKFASVAENTLTARSHRAAELMTKTLPDILTFNLDIVIIG
INPGLMAAYKGHHYPGPGNHFWKCLFLSGLSDTQLNHLDDQSLPEKYGIGFTNMVERTTP
GSKDLSSKEFREGGRILVEKLKKYKPLVAAFNGKCIYEIFSKEIFGFKIKKFEFGLQPHK
IPETETVCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGVSVPEEVQETEYTFDLE
KAKEDAKKMAIKEEQYDPGYEAAFGGAYGEVGPESNGHCNFSSVGPEAASGGAVPALAVG
QLPDGQWMTQSFADQIPDIGGCGAPQPRGAEAVQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagcagtacgcgtctttgacggtgcctacggagtacctacagcactggtgg
cgcaaattcgcctcggtggccgaaaacactttgaccgcccggagtcatcgtgcggcggag
ctcatgaccaagacactgcccgacatcctgaccttcaatctcgacatcgtcatcattggt
attaacccaggactgatggcagcttataagggccatcattaccctggccctggaaaccat
ttttggaagtgccttttcctgtctggtctcagcgacacccagctgaatcacctggatgac
cagtccttgccagagaagtatgggataggtttcacaaacatggtagagaggacgactcca
ggaagtaaagacctgtcaagcaaagagtttcgtgaaggtggaaggattctggtagagaag
ctgaagaagtataagcccctggttgctgctttcaatggaaaatgtatttatgaaatattc
agcaaagaaatatttggcttcaagatcaagaaatttgaatttggtttacagcctcacaag
atcccggaaactgaaacagtgtgctacgtgatgccctcgtccagtgcgcggtgcgcccag
ttcccccgtgcgcaggacaaggtgcactactacatcaagctgaaggatctgcgggaccag
ctcaagggcgtgagcgtccccgaggaggtgcaggagacggagtacaccttcgacctggag
aaggccaaagaggatgcaaagaagatggccatcaaggaggagcagtacgacccaggttac
gaggctgcttttggaggggcgtatggggaagtggggccggagagcaacggccactgcaac
ttctcatcggtcgggccagaagccgccagcgggggcgcggtgcctgccctcgccgtcggg
cagctcccggacgggcagtggatgacccagtcgtttgcggatcagattccggacatcggc
ggctgcggcgctccccagccgcgaggcgccgaggccgtgcagtga
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