Lepisosteus oculatus (spotted gar): 102684692
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Entry
102684692 CDS
T07349
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08536
liver X receptor alpha
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03320
PPAR signaling pathway
loc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102684692 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
102684692 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
loc03000
]
102684692 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
loc03310
]
102684692 (nr1h3)
Transcription factors [BR:
loc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102684692 (nr1h3)
Nuclear receptors [BR:
loc03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
102684692 (nr1h3)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
102684692
NCBI-ProteinID:
XP_015194127
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Position
LG27:complement(12993666..13017225)
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AA seq
443 aa
AA seq
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MSALSATNIADVGHGDGRVFPPSPELLLDCSSAEETSSSLVTEGGHDPQQIGLPPPRPGP
PARGHKSEPGTPDLSCQLPMDAAADALAASPGRWPAACEPWAAAGVGLWAGLQEGQRLSS
ASSVRAPRSPLCRSAPVALRVVYCPGGSGCHSSTCLTSLRNAGVLSEEQIRLKKMKKQHE
DESVRTAAAPQAPAPWTEPPKLAPEQLEMIEKLVAVQKQCNKRSFIDRPKVTPWPQNQDP
LNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQIALLKTSTIEIMLLETSR
RYNPAIESITFLKDFSYNKEDFAKAGLQFEFINPIFEFSKGMNDLHLDEAEYALLIAINI
FSADRPNVQDHDLVERLQQPYVDALHSYIRIKRPNDHLMFPRMLMKLVSLRTLSSVHSEQ
VFALRLQDKKLPPLLSEIWDVHE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcactgtctgcgactaatatcgctgatgttggtcacggcgatggcagagtgttc
cccccgtcgccagagctgctcctggactgcagcagcgcggaggagacgagcagcagcctg
gtgaccgagggcggccatgacccccagcagatcgggctgcccccccctcgccccgggccg
cccgctcggggccacaagagcgagccgggcaccccggacctgagctgccagctgcccatg
gacgcggctgccgacgcactggcggcgagcccaggtaggtggcctgcagcctgcgagcca
tgggctgctgcaggggttggcctttgggctgggctgcaggagggccagcgcctgtcctcc
gcgtcatcagtccgagccccgcgctctcccctgtgtcgcagcgccccggtcgctttgaga
gtcgtttactgccccggtggctcaggttgtcactcgtcgacctgtttgacctccttgcgg
aacgcaggcgtgctgtccgaggagcagatccggctgaagaagatgaagaagcagcacgag
gacgagtcggtccgcacggccgccgccccgcaggcccccgccccctggacggagcccccc
aagctggcaccggagcagctggagatgatcgagaagcttgtggccgtgcagaaacagtgc
aacaagcgatccttcatcgaccggcccaaagtcacaccgtggccccagaaccaggacccg
ctgaaccgcgaggtgcgccagcagcgcttcgcccacttcaccgagctggccatcatgtcg
gtgcaggagatcgtggacttcgccaagcagctgccgggcttcctggagctgacccgggag
gaccagatcgctctgctgaagacctccaccatcgagatcatgctcctggagacctccagg
aggtacaacccagccatcgagagcatcacctttctgaaagacttcagttacaacaaggag
gatttcgcgaaagcaggcctacagtttgagttcatcaaccccattttcgagttctccaag
gggatgaatgacctgcacctggacgaagcagaatacgcgctgctgatcgcaatcaacatc
ttctctgcagaccggccgaatgtccaagaccacgatttggtggagaggctgcagcagccc
tacgtagacgcacttcattcgtacatcaggataaagagacccaacgaccacctgatgttt
ccccgcatgctgatgaagctggtgagcctgcggaccctcagcagcgtgcactcggagcag
gtcttcgctctgcgcctccaggacaagaagctgcccccgctgctgtccgagatctgggac
gtccacgagtga
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