Lepisosteus oculatus (spotted gar): 102684712
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Entry
102684712 CDS
T07349
Symbol
clg4h9orf72
Name
(RefSeq) protein C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102684712 (clg4h9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102684712 (clg4h9orf72)
Membrane trafficking [BR:
loc04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
102684712 (clg4h9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
102684712
NCBI-ProteinID:
XP_006629869
Ensembl:
ENSLOCG00000012179
UniProt:
W5N2X1
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All DBs
Position
LG4:complement(51862687..51883470)
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AA seq
461 aa
AA seq
DB search
MSSGCPPQSPAVAKTEVVLKGKSPLLAATFAYWDNILGPRVRHIWAPKSEQVLLSDGEIT
FLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGDLKGDKNTCALSIILPQTE
LSFYLPLHTVCVERLKHIIRKGRIWMQKGYNIISVLNTEIIPIMDLLSSMKTHSVPEHID
IKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSIVVGSNPEKVNKIVRTLCLFLTPAER
KCSRLCGGESSFRYDTGLFVQGLLKDATGSFVLPFRQVLYSPYPTTHIDVDINTVKQMPP
CHEHIYNQRRYMRSELSALWKAASDEEITPDTIILADETFTPDLNIFQDVMHKDTLVKSF
LDQVFHLKPGLSLRSTFLAQFMLVLHRKALTLLKYIDDETQKGKKPFRSLRSLKTDLDLT
VEGDLSIVMALAEKLKSGLHTFVFGKPFYTSVQERDVLMSF
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggctgcccaccccagtccccagccgtggctaagaccgaggttgttttgaaa
gggaagtcgccgctcttagccgccacctttgcctactgggacaacatcctgggcccgaga
gtgcggcacatctgggcgccgaagtcagagcaggtgcttctcagcgacggcgagatcacg
ttcttggccaaccacaccctgaacggggagatcctgcggagcgccgagtgcggagccgtg
gatgtgaagttctttgtgctggcggagaagggggtcatcatcgtgtccttgatcttcgac
ggggacctaaagggggacaagaacacctgcgccctctccatcatcctgcctcagaccgag
ctgagcttttacctgcctctgcacacggtttgcgtggagagactgaagcacatcattcgc
aaaggaaggatatggatgcagaagggatacaacattatatcagtactgaacactgaaatt
attcctataatggatctcctttcttctatgaagacgcacagtgttccagagcacatagac
attaaagacacagtgctaaatgatgacgacattggagatagctgccatgaagattttctt
cacaaggcaatcagttcacacttgcagacatgtggctgttctatagtggtggggagcaat
ccagagaaggttaacaagattgttcgaaccctttgtcttttcctcactccagcagaacgg
aaatgttcacggctctgtgggggagaatcatccttcagatatgacaccggcctctttgtc
cagggcctgctgaaggatgccacaggtagttttgtgctgccctttcgccaggttctttat
tctccgtaccccaccacgcatatcgacgttgacattaacacagtgaagcaaatgccacct
tgccacgagcacatctacaaccagcgccgctacatgagatcagagctgtctgccctctgg
aaggcagcatctgatgaagagataactcctgataccatcatacttgcagatgaaactttc
actcctgacttgaatatttttcaagatgtcatgcataaagacacacttgtgaaatcattt
ttagatcaggtgtttcatctgaagcctgggctgtctctcagaagtacgtttcttgctcag
tttatgcttgtccttcacaggaaagcactcactttactaaaatacatagatgatgaaaca
caaaaggggaagaagccatttaggtctcttcgaagcctgaagacagacctagatctgaca
gtcgaaggagatctcagcatcgtgatggcgctggctgagaagctgaagtctggtctacac
acgtttgtatttggaaagcctttctacaccagtgtgcaggagagagatgttctcatgagt
ttttaa
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