Lepisosteus oculatus (spotted gar): 102685862
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Entry
102685862 CDS
T07349
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04620
Toll-like receptor signaling pathway
loc04621
NOD-like receptor signaling pathway
loc04622
RIG-I-like receptor signaling pathway
loc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102685862 (traf3)
04621 NOD-like receptor signaling pathway
102685862 (traf3)
04622 RIG-I-like receptor signaling pathway
102685862 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102685862 (traf3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4_2
zf-C3HC4
Sina_ZnF
zf-RING_UBOX
EzrA
zf-rbx1
zf-C3HC4_4
zf-RING_4
zf-RING_5
zf-TRAF_2
zf-RING_2
FapA
Mod_r
Fez1
zf-RING_6
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
102685862
NCBI-ProteinID:
XP_006632233
Ensembl:
ENSLOCG00000009826
LinkDB
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Position
LG7:6265012..6302922
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AA seq
618 aa
AA seq
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MESSRRAYWTAGMSVQGSLEPVGPLESVARAQAGQDTLQTGLGVMSSGRNAEVPRELQVP
LHHRLASLPNPSLSQRAWAEPGLLPPHGGFRDRFVLPPEDKYRCESCRLVLCNPRQTECG
HRFCETCIADLLSKPNAVCPADDEPLFADKIFRDVCCHREIMALKVHCRSEKNGCKEQMS
LQTVMDHLNACPYFEVPCPLGKCKEKMMRKDMPEHLNWKCKYREETCQYCKRKMAVTEIQ
KHKETVCPSYPVPCPNKCSYTAILRSELPNHQHDCPNAQTNCVFSRYGCTFKGLNQEMRA
HEASCISDHLKLMVTRNLALETKMEDVKRELNERHKVLPGLHARLTEMETRYDEIREKTK
QMELKIGSIQKLASSHSEKLLEMEMEVRSMRMAREEMETLRGTMEAIRSRVTLLEGGRVV
PSTGTHTLGTLETQISRHDNMLSMHEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQ
EAVAAKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPF
KQKVTLMLMDQGSSRKHLGDAFKPDPNSSSFRRPVGDMNIASGCPLFVAQTVLENGTYIK
DDTIFIKVTVDTSDLPDP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggagtccagcagaagagcgtactggaccgcgggaatgtctgtgcagggctctctggag
cccgttggtccgttggaaagtgtggcgcgtgcccaggctgggcaggacaccctgcagact
gggctgggggtcatgtcatcgggccggaatgcggaagtgccccgcgagctgcaggtgccc
ctgcaccaccgcctggcctccctgcccaacccctccctgtcccagcgggcctgggccgag
ccgggcctcctgcccccccacggaggcttccgggaccgcttcgtcctcccgcccgaggac
aagtaccgctgcgagtcctgccggctggtgctgtgcaacccgcggcagacggagtgtggg
caccgcttctgcgagacctgcatcgccgacctgctcagcaaaccaaatgcagtgtgccca
gcagacgatgagcctttgtttgcagacaagatatttagggacgtgtgctgccatcgagag
attatggcgctcaaggtgcactgcaggagtgaaaagaacgggtgcaaagagcagatgagt
ttacaaaccgttatggatcacctgaatgcgtgcccgtattttgaagtcccctgccccctt
ggtaaatgtaaggagaagatgatgaggaaggacatgcctgagcacttgaactggaagtgc
aaataccgggaggagacctgccagtactgcaagcggaagatggcggtcacagagatacag
aaacacaaagagactgtatgtccttcctatccagtgccctgccccaataaatgtagttac
actgctattttaaggagtgagctccctaatcaccaacatgattgcccaaatgcccagact
aactgtgtgttcagtcgctatggatgcacgttcaagggtctcaatcaggaaatgagggcc
cacgaagccagttgtatttcggatcacctcaagcttatggtcaccaggaaccttgctttg
gaaaccaagatggaggatgtgaagagggaacttaacgagcggcacaaagtcctgccgggg
ctccacgctcgcctcacggagatggaaacgcggtatgatgaaatccgagaaaagaccaag
caaatggaactgaagatcggaagcatccagaagctggccagctcgcactcggagaagctg
ctggagatggagatggaggtccggtccatgcggatggcccgggaggagatggagacgctg
cgcgggacgatggaggccatccgcagccgggtcacgctgctggaggggggccgggtcgtg
cccagcaccggcacacacacactaggcactttagagacgcagatctcccggcacgacaac
atgctgagcatgcacgagatccgcctggccgacatggacctccgcttccaggtcctggag
accgccagctacaacggcacgctcatctggaagatccgcgactacaagcggcggaaacag
gaggccgtggccgccaagaccctgtccctgtacagccagcccttctacacggggtacttc
ggctacaagatgtgcgcccgggtctacctcaacggggacgggatgggcaagggcacgcac
ctgtctttgtttttcgtggtgatgcgcggggagtacgatgccttgctgccgtggcctttc
aagcagaaagtgacgctcatgctgatggaccagggctcgtcccggaagcacctgggggac
gccttcaagccagaccccaacagcagcagtttccggaggccggtgggggacatgaacatt
gcctcgggctgcccgctgtttgtggcgcagacggtgctggagaacgggacgtacataaag
gacgataccatatttattaaagtgacagtcgacacctctgacctgcctgacccttga
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