Lepisosteus oculatus (spotted gar): 102685958
Help
Entry
102685958 CDS
T07349
Symbol
pdgfa
Name
(RefSeq) platelet-derived growth factor subunit A isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04010
MAPK signaling pathway
loc04020
Calcium signaling pathway
loc04510
Focal adhesion
loc04540
Gap junction
loc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102685958 (pdgfa)
04020 Calcium signaling pathway
102685958 (pdgfa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102685958 (pdgfa)
04540 Gap junction
102685958 (pdgfa)
09142 Cell motility
04810 Regulation of actin cytoskeleton
102685958 (pdgfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
loc04052
]
102685958 (pdgfa)
00536 Glycosaminoglycan binding proteins [BR:
loc00536
]
102685958 (pdgfa)
Cytokines and neuropeptides [BR:
loc04052
]
Cytokines
Growth factors (RTK binding)
102685958 (pdgfa)
Glycosaminoglycan binding proteins [BR:
loc00536
]
Heparan sulfate / Heparin
Growth factors/receptors
102685958 (pdgfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
DUF2112
Motif
Other DBs
NCBI-GeneID:
102685958
NCBI-ProteinID:
XP_015215288
Ensembl:
ENSLOCG00000001558
LinkDB
All DBs
Position
LG13:complement(1753327..1778702)
Genome browser
AA seq
227 aa
AA seq
DB search
MRNTVYCLFACSLYLLSAIAEEVEIPQELIERLSRSEIRSISDLQRLLELDSVGSENEII
PESKERSHKDYSASHADLKNSQTLVRRKRSIEEAVPAVCKTRTVIYEIPRSQIDPTSANF
LIWPPCVEVKRCTGCCNTNNMKCHAARRHHRTVKVAKVEYVRRRPKLKEVLVRLEEHLEC
VCIPQHHVTEHTEAETAPPPLFTGRSRATGKKWKRQKLKHNKDLLPT
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacacagtttactgtttgttcgcctgctctttatacctgctgtctgctattgct
gaggaggtagagataccccaggagcttattgaaagactgtctcgcagtgaaattcgctcc
attagcgatctccagcgcctccttgagcttgactccgtagggagtgagaatgaaattatt
ccagaatccaaagagagatcacacaaggattattctgcaagccatgccgatttgaagaac
tcacagacattagttagaaggaagcgaagcatcgaggaagccgtcccagcggtgtgcaaa
acccggacagtcatctacgagatcccgcgcagccagatcgatcccacctccgccaacttc
ctgatatggccgccctgcgtggaggtgaagcgctgcacgggctgctgcaacaccaacaac
atgaaatgccacgcggcgcggaggcatcacaggacggtgaaggtggccaaagttgagtat
gtcaggagaagacccaaattaaaagaggttcttgtgagattagaagagcatttggaatgt
gtctgtataccacagcatcatgtcacagagcacacagaggcagaaacagccccgccccct
ctgtttacagggcgaagtagggccacaggtaaaaaatggaaacgccaaaagctaaaacac
aacaaggacttattgccgacgtaa
DBGET
integrated database retrieval system
