Lepisosteus oculatus (spotted gar): 102686698
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Entry
102686698 CDS
T07349
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B'
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102686698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102686698
03041 Spliceosome [BR:
loc03041
]
102686698
03032 DNA replication proteins [BR:
loc03032
]
102686698
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
102686698
Spliceosome [BR:
loc03041
]
Complex A
U1 snRNP components
Sm proteins
102686698
U2 snRNP components
102686698
Complex B
U1 snRNP components
102686698
U4/U6.U5 tri-snRNP components
102686698
Complex C
U2 snRNP components
102686698
DNA replication proteins [BR:
loc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
102686698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
102686698
NCBI-ProteinID:
XP_015220222
Ensembl:
ENSLOCG00000002687
UniProt:
W5M447
LinkDB
All DBs
Position
LG18:complement(6175484..6180752)
Genome browser
AA seq
238 aa
AA seq
DB search
MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGVAGGPGVGRAAGRGVPAGAPM
PQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAGASIAGAPTQYPPGRGGPPPPMGRG
APPPGMMGPPPGMRPPMGPPMGMPPGRGAPMGMPPPGMRPPPPGMRGPPPPGMRPPRP
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgggaaagagcagtaagatgttgcagcacatcgactacaggatgcgctgtatt
ctccaggatgggcgcatcttcattgggaccttcaaggccttcgacaaacacatgaacctc
atcctgtgtgactgcgacgagttcagaaagatcaagccaaagaactcgaagcagccggag
cgcgaggagaagagagttttggggctggtactgcttcgtggtgagaacctggtgtcaatg
accgtggagggtcccccacccaaagacactggcattgcccgtgtgcccctggctggcgtg
gccggaggtcctggtgtgggccgcgcggcaggtaggggggttcccgcaggagctccaatg
ccacaggcacccgctgggttggccggccctgtccgcggcgtgggaggcccctcgcaacag
gtgatgaccccacagggcagggggacggtagcggcggcagcagcaggggccagcattgca
ggggcccccacccagtatcccccaggaagaggtggacccccaccccccatgggccgcgga
gcacccccaccaggtatgatgggccctccgcctggcatgaggcccccaatgggcccaccc
atgggcatgcctcctggccgcggagccccaatgggcatgcccccgccagggatgagacca
cccccccctgggatgagaggaccccctcctccaggaatgcgcccccccaggccctga
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