Lepisosteus oculatus (spotted gar): 102692077
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Entry
102692077 CDS
T07349
Symbol
nup210
Name
(RefSeq) nuclear pore membrane glycoprotein 210
KO
K14314
nuclear pore complex protein Nup210
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102692077 (nup210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102692077 (nup210)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102692077 (nup210)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_4th
Ig_NUP210_9th
Ig_NUP210_1st
Ig_NUP210_7th
Ig_NUP210_6th
Big_2
AlphaC_N
Motif
Other DBs
NCBI-GeneID:
102692077
NCBI-ProteinID:
XP_015203546
Ensembl:
ENSLOCG00000014031
LinkDB
All DBs
Position
LG5:complement(47386391..47438437)
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AA seq
1327 aa
AA seq
DB search
MYKDHIAPRGPLTLCFYLKQKSTLEKKKEMASATVLSLIVLMVLFYDPIFCSSASKLNIP
KVLLPLARSTKINFTLEATEGCYRWSSTRPEVASIDAVDLDERQCSQRAILQARSSQLTR
LTSIIIAEDVLTGQVLRCDAIVDVISEIQIVSTTRELHLEDSPLELRIHALDSEGNTFST
LAGLVFDWSIVKDADTASFSDSYNALRVLKFSESTYTPPAYISEMEKVGKQGDIILVSGI
KTGNSKIKAKIQESLYKNVPAAEVRLLILENILLNPAYDIYLLVGTSIQYRVQKIRQGKI
TELVMPCDQYELQLQNSILGPDGDVRIPVAKLDRATSTVTALQRGQTNIVLDHKSLRMQG
ASRLPNSTLYVVEPGYLGFKIHPGDRWVLETGRTYEILIEVFDKSSNKVHLSDNIRIEAV
FPKAYFKILESSFNGSYHHVKALQNGQTVIDAALTSVVDQDGGVHVFSIPVRNQQDVEIY
NPIVLTPRILTFPWQPKIGAYQYTIKADGGSGNFTWSSSNQDVATVTVKGVMTTVSDVGV
SVVQAHDVQNPLHYGKMKVYVIEPVGMDFIPCQVEARVGQTLDLPLRIFGLLSVETGEKV
TLSDCSHFDLVVEVENKGIFKFLEGRLKPGQDYCSGVRVQALATGDTVLLVSYTHGHLHL
SARITIAAYQPLKAIDPVSVALVTLGSSKDMLFEGGPKPWVLEPSKFFRNLTAEDPGSVG
LALFGPASRNYFQHWVRATCRAFGEQVLAVTVGNQPSLTNPFPAVEPAVVKLVCAPPSRL
TLVPVYTNPQLDLSCPLLQQNKQLVPVSNYRNPVLDLAVYDQQGRKFDNFSSLSIIWEST
KVSLASIEPTMPMEQHIKEDGNGQKKLHGRQTVLVHRESGVTAITVTAIGYQASHLSAAR
VQSLYDPLTAVSATLELLLVKDVQVSPEAITIYNHPDVRAELALREGSGYFFVNTSIGGI
ANIAYQESRGTAEVLPIRPGILQAMVHDLCLAFPAPAKASIHISDIFEVYVRVVDKVEIG
KSVKAYVRVLDDNKKPFLAKYFHFMDLKLKAASPIVSLLPLSESSENDTATFLVQGLTIG
QTSLAAVVLDKSGKRISSAPQQIEVFPPFRLIPRKVTLIIGGMMQITSEGGPQPQSHIIF
SIGNEKIASVNSNGLTRGITVGNVTVTGVVQAVDAETGKLVIVSQDQVHVEVLQLKAVRI
RAPITRMKTGTQMPVYVMGITSSQTPFSFGNALPGLTFHWSVTKRDILDIQTRHSEASLQ
LPAENNFAMNVYGRTKGRTGLKVVVKTVSPASGHLEGNVPELSDEIQIQGILSTVHHGPD
PVKHVRR
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagatcatatcgcgccgcgtggtccgttaacgttgtgcttttatttaaagcaa
aaaagcactttagaaaaaaaaaaggaaatggcgagtgcaacggtactttcattgattgtg
ttaatggttttattttatgatccgatattttgttcgagtgcctctaaattgaatatccca
aaggtcttgttgcctttagccagaagcaccaaaataaattttaccttggaagcaactgaa
ggatgttacagatggtcttccaccagaccggaggtagccagtattgatgctgttgatctc
gatgaacgccagtgttcccaaagagccatcctgcaggcacgctcctcccagcttaccaga
ctcaccagtattattattgcggaggatgttttgactggtcaagtcctacgctgtgacgct
attgtggatgttattagtgaaattcagattgtctcaaccactcgggaactacacttggaa
gattctcccttagaactgaggattcatgcactggactctgaaggaaatactttcagtaca
ttggcagggctggtttttgactggtccatagtgaaagatgcagacactgctagcttctca
gattcctataatgcattacgggtactcaagttctcagaatctacatatactcccccagcc
tacatttcagagatggagaaagtgggcaagcaaggagatattattttggtgtcgggaata
aaaactggaaattccaaaataaaagcgaaaatacaggagtcattgtacaagaatgtgcca
gctgcagaagtcagactcttaatcctagaaaacatacttttgaacccggcatacgatatt
tacttacttgtgggtacttctattcaatatagggtacagaagattcgtcagggaaagatt
acagagttagtgatgccatgtgatcagtatgaactgcagctgcagaacagcatcttagga
ccagatggagatgtgaggatacctgtggccaaactggacagagcaacatcgactgtaaca
gcgctccagcgtggacagaccaacatagttcttgaccacaagagtcttcgtatgcaggga
gcatctagattgccaaacagcacgttgtatgttgtggagccaggatatttagggtttaaa
atccatccaggagacagatgggtccttgaaacaggaagaacgtatgaaattctcattgaa
gtatttgacaaatcaagcaataaggtccatttgtcagataacatccggattgaggcagtc
tttccaaaggcgtattttaagatattagagtcctccttcaatggttcatatcatcatgtg
aaggctttgcaaaatggccaaactgtaatagatgctgcacttacatctgttgtggatcag
gatggtggtgttcatgttttttccattccagtccgtaaccaacaggatgtcgaaatttat
aatcccatagttcttactccaagaattttaacattcccatggcaacccaaaataggagcg
taccagtacacaataaaggcagatggagggagtggaaattttacctggtcctcatccaac
caagacgttgcaacagtgactgtcaaaggagttatgacgactgtcagcgatgtgggagtc
agtgttgttcaggcacatgatgtacagaatcctctacattatggaaagatgaaggtctat
gtgatagaaccagtgggaatggattttattccgtgtcaagttgaggctcgtgtgggtcaa
accctggatctgcctctcaggatatttgggcttctcagcgtggagacgggggagaaggta
acactcagtgactgctcccattttgatctggttgtagaagtggagaacaaaggtatcttc
aagttcctggaagggaggttgaaaccaggccaggattactgcagtggagtgagagtacag
gctttggcaactggtgacacagtgctgctggtcagttacacgcatggccaccttcactta
agtgctagaattaccattgcggcctatcaacctcttaaagcaattgatccagtgtctgtt
gcgctggtcacacttggctcctctaaagacatgctctttgaaggaggaccgaagccctgg
gtgctggaaccctccaagtttttcaggaacctcacagctgaagacccagggagtgtgggc
ctggctctctttggccctgcgtcgaggaactacttccagcactgggtcagagcaacgtgc
agggcgttcggcgaacaggtcctcgccgtgaccgttgggaaccagcccagtttgacgaac
ccctttcctgcagtggagcccgcagttgtgaagctcgtgtgcgctcccccttcccggctc
actttagttcccgtctacaccaacccccagctcgacttgtcctgtccgttgctacagcag
aacaagcaactggtacctgtttccaactaccggaatcctgtgttggatttggcggtctac
gatcagcaagggagaaaatttgacaacttcagttcattaagtattatctgggagtcaaca
aaggtttctttagcaagtatagaaccaaccatgcccatggaacagcacattaaggaagat
ggaaacggacagaaaaaacttcatggtcgtcaaacggtgcttgtccatcgggaatctggg
gtcactgctattacagtaaccgccattggataccaggcctcacacctcagtgcggccagg
gtgcagagtctgtatgatcctctcacagcagtatcagccactcttgagctcttgctggtg
aaagatgtacaagttagtcctgaagccatcactatatataaccatcctgatgtgcgggca
gagcttgccctccgtgaaggatctggctatttttttgttaacacaagcattggcggtatt
gcgaacatagcctaccaagaatcaagaggaactgcagaggtgctgcccattcgcccaggg
attcttcaagccatggttcatgatctgtgcttggctttcccagctcctgctaaagcctcc
atccacatctcggatatctttgaagtgtacgtccgagtggttgacaaggtagagattgga
aagtcggtgaaagcttatgttcgagtcttggatgataacaagaaacccttcttggctaaa
tattttcatttcatggatttaaaactaaaagctgcatctccgatagtttctttgttgccc
ctttctgaatcttctgaaaacgacacggcaacctttctagtccagggcttaacaatagga
cagacgagtctggctgctgtagtgttggacaaaagtggaaaacgaatcagttctgcacca
cagcaaatcgaagtatttccacctttcagactgataccaaggaaagttaccctgattatt
ggtggaatgatgcagattacatctgaaggaggacctcagcctcagtcccatataattttt
tccatcgggaatgagaagattgcttcagtaaatagcaatggtctcaccagggggattact
gttggaaatgtgaccgtgactggagtggtgcaagctgtagatgcagaaactgggaagctt
gttattgtgtctcaggatcaagtacacgtggaggttttgcagttgaaggcagttagaatc
cgtgcaccgatcacaagaatgaagactggtacccagatgcccgtgtatgtaatgggaata
accagtagccagactccattttcatttgggaatgcccttcctggcttgacattccactgg
tctgtcacaaagagggacattctggatattcagactcggcattctgaggcatctttgcag
ctcccagcagaaaacaattttgctatgaatgtatatgggaggacaaagggaagaacgggc
ttgaaagttgtggtgaaaactgtcagtcctgcttctgggcatttggagggcaatgtaccg
gagctctctgacgaaatacagattcagggcatcctttccactgttcaccacggcccagat
cccgtcaaacacgtcagaaggtag
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