Lepisosteus oculatus (spotted gar): 102693349
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Entry
102693349 CDS
T07349
Symbol
cxcl12
Name
(RefSeq) stromal cell-derived factor 1 isoform X1
KO
K10031
C-X-C motif chemokine 12
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04060
Cytokine-cytokine receptor interaction
loc04672
Intestinal immune network for IgA production
loc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
102693349 (cxcl12)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102693349 (cxcl12)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
102693349 (cxcl12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
loc04052
]
102693349 (cxcl12)
00536 Glycosaminoglycan binding proteins [BR:
loc00536
]
102693349 (cxcl12)
Cytokines and neuropeptides [BR:
loc04052
]
Cytokines
Chemokines
102693349 (cxcl12)
Glycosaminoglycan binding proteins [BR:
loc00536
]
Heparan sulfate / Heparin
Chemokines
102693349 (cxcl12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
DUF1363
Motif
Other DBs
NCBI-GeneID:
102693349
NCBI-ProteinID:
XP_006630313
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All DBs
Position
LG5:complement(5051052..5061456)
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AA seq
99 aa
AA seq
DB search
MDLKAVAVTTLLMVTLCLQESNAKPFSLGERCWCRGTESFVPKSSVKQLKFLNTPNCPFQ
VVVTLKNSKEVCISPQTKWLQQYLKNALNKIKKEGRSGN
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaaagctgttgcagtgaccactctcctgatggtgactctctgcctgcaggag
tccaacgctaaacccttcagtctgggagagaggtgctggtgccgaggtacagagagcttc
gtacccaagagcagcgtcaagcagctgaagttcctgaacactcccaactgccccttccaa
gtcgttgtcacgctgaaaaacagcaaagaagtgtgcattagccctcagactaagtggctg
cagcagtacttaaagaatgctcttaacaaaattaaaaaggagggaagatcaggcaattaa
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