Lepisosteus oculatus (spotted gar): 102694228
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Entry
102694228 CDS
T07349
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
loc03041
]
102694228 (dhx9)
03012 Translation factors [BR:
loc03012
]
102694228 (dhx9)
Enzymes [BR:
loc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
102694228 (dhx9)
5.6.2.6 RNA 3'-5' helicase
102694228 (dhx9)
Spliceosome [BR:
loc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102694228 (dhx9)
Translation factors [BR:
loc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102694228 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
AAA_19
nSTAND3
AAA_22
AAA_14
ATPase
PhoH
DUF4162
GED
Motif
Other DBs
NCBI-GeneID:
102694228
NCBI-ProteinID:
XP_015210584
Ensembl:
ENSLOCG00000002158
LinkDB
All DBs
Position
LG10:complement(1271160..1284214)
Genome browser
AA seq
1266 aa
AA seq
DB search
MGDIKNFLYAWCGKRKVTPNYEIRAAGNKNRQKFMCEVRVEGFNYTGMGNSTNKKDAQAN
AARDFVNYLVRMGEVNASDVPALGASLPASDCPDGGGGGGAGAGSGGGFGNLPPNGPIPP
HLIVKAEQGSEAGPSSGPVPGVTGLGYSGFNNAQWDRGANLKDYYSKKEEQEAQATLESE
EVDLNAGLHGNWTLENAKARLNQFFQKEKNQSDYKYSQVGPDHNRSFIAEMSIFVRQLGR
KIFAREHGSNKKLAAQSCALSLVRQLYHLGVIEAYTGQTKKKEGETLEAFEVNVTDDLQR
QLHSVVQELGLQIPLPPEAPGNPVSLIQGKIAHFEPSQKQSMAGVVPWSPPQVNWNPWTS
SNIDDGPLAFCTPEQISSDLQNELMYQLEHDQTLQQILQEREQLPVKKFEQEIMTAIHSN
SVVIIRGATGCGKTTQVPQYILDEYIKNGKASDCNIVVTQPRRISAVSVAERVGSERGED
LGKSCGYSVRFESILPRPHASILFCTVGVLLRKLESGIRGISHVIVDEIHERDLNTDFLM
VVLRDVVQAFPEIRVILMSATIDTTMFREYFFNCPVIEVFGRTYPVQEYFLEDCIQMTQF
VPPPSDKKKKDKDEEGGDEETNCNVICGPEYGPETKNSMAQINEKETPFELIEALLKYIE
TLSVPGAVLVFLPGWNLIYSMQRHLEMNPHFASHRYRVLPLHSQIPREEQRRVFDPVPDN
VTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRA
GRVRPGFCFHLCSRTRFERLETHMTPEIFRTPLHEVALSIKLLRLGGIGHFLSKAIEPPP
LDAVIEAEHTLRELDALDTNDELTPLGRILAKLPIEPRLGKMMIMGCIINVGDAVCTISA
ATCFPEPFINEGKRLGFVHRNFAGTRFSDHVALLSVFQAWDDARMGGEDAEVRFCEHKRL
NMATLRMTWEAKVQLKDILVNSGFPEECLMTQMFNNFGPDNNLDVVISLLTFGFYPNVCY
HKEKRKILTTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVSPL
QLILFGSKKITSDGELILLDEWIKLKMPHDVAACIAALRTGVEALVVEVTKDPEYIRQMG
PVNERMLNIIRQISKPSAAGIHLMVNNSRFGDGPRPPKMARYEGGGGYRGRGGYQGGGGY
GGGGGYGGGGYGRGGGYGGFGNGGGGGGYRGGGYGGGGGGFRGSGYGGYRGGGGHRGGGG
YRGGAF
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacattaaaaacttcctttacgcctggtgtggaaagaggaaagtcactcccaac
tatgaaattcgagcagctggaaacaaaaaccgacagaaatttatgtgtgaggtccgtgtc
gagggtttcaactacactggaatgggaaactccaccaataagaaggatgctcaagccaat
gctgccagagatttcgtcaattaccttgtccgtatgggggaagtgaatgctagtgacgtc
cctgcattgggggccagtttaccagccagtgattgtcctgatggtggaggagggggagga
gcaggtgcaggcagcggcggcggctttggaaatctgcctccaaacggacctattcctcca
catctgattgtaaaggctgagcaaggttctgaagcaggacctagctcgggacctgttcca
ggggtgactggtttgggctattctggttttaacaatgcccagtgggatcgtggcgccaat
cttaaggattactactcaaagaaggaggaacaagaagcacaagcaactctcgagtctgaa
gaagttgatttgaatgctgggcttcatggtaactggactctagagaatgccaaagcccgt
ctgaaccagttctttcagaaggaaaagaaccagtcagactacaaatacagccaagttggg
cctgaccacaacaggagttttattgctgaaatgagtatttttgtaaggcaactgggcaga
aaaatctttgcccgtgagcatggctctaacaagaagctggctgcccagtcctgcgcgctc
tctcttgttagacagctctaccatcttggagtaattgaggcttacacgggacaaaccaaa
aagaaagaaggagaaacgctggaagcctttgaagtaaatgttactgacgatttgcagcgg
cagctgcactctgtcgttcaggagctgggccttcagattcctctaccgcccgaagccccc
ggcaatcctgtttcattgatacagggcaaaattgcccattttgagccctcccagaagcag
agcatggctggtgtagtgccgtggtcaccaccacaagtcaactggaacccctggacaagc
agtaatattgatgatggacctcttgctttttgtaccccggaacagatcagttcagatcta
caaaatgaactgatgtatcagctggaacatgaccaaaccctgcaacagattcttcaagag
cgtgagcagctgcccgtgaagaagtttgaacaggagattatgactgcaatccacagtaat
tctgtcgtcatcattagaggtgccacaggctgtggaaaaaccactcaggttccgcagtat
atcctggatgaatacatcaagaatggaaaagcttcagattgtaacattgttgtcacccag
cctcgccgaatcagtgcggtttctgtagctgaacgtgtcggctctgagcggggcgaagat
ttggggaaaagctgtgggtacagtgtgcgtttcgagtccatcctgcccagaccccacgcc
agcattcttttctgcacagtgggtgtactgctaagaaaattggaatctggtattcgagga
atcagtcatgtcattgtggatgaaattcatgaaagagatctgaatactgactttcttatg
gttgtcctgagggatgttgtacaggctttcccagaaatcagagtcattctcatgtctgct
actattgacaccaccatgttccgtgaatatttcttcaactgtccagtgatagaggttttt
ggacgaacatatccagttcaagagtatttcctggaggactgtatccagatgactcagttt
gttcctcccccatctgataaaaagaaaaaggataaagatgaagagggtggagatgaagag
acaaactgtaatgttatatgtggaccagaatatggccccgagaccaaaaactccatggcc
cagataaatgagaaggaaacgccctttgaactgattgaagctttgctgaaatacattgaa
acactcagcgttcctggagctgtgctggtgttcttgcctggctggaatctcatttactct
atgcagaggcatctggagatgaatccacattttgcaagtcaccgctatagggttttgcct
ttacactcccagattccacgtgaggaacagaggagagtgtttgatcctgtgcccgacaat
gttacaaaggttatcttgtccacaaatattgcagagaccagtattacaatcaatgatgtt
gtctacgtgattgactcctgcaagcaaaaggttaaactgtttacagcccacaacaacatg
actaactatgctacagtctgggcatccaagacaaatttggaacagcggaaaggcagagct
ggccgagtccgacctggattctgtttccatctgtgtagcagaacacgctttgaaagactc
gaaacacacatgacccctgagattttccgtactcctctgcatgaagtagccctcagcatc
aagcttctaaggcttgggggcattggacatttcttatcaaaagctattgagcctcctccc
ttggatgcagttattgaagcagagcatactttgagagaactggatgctttggataccaat
gatgagttgacccctctaggcagaatccttgccaaactccccattgaaccacgtcttgga
aagatgatgattatgggctgcattatcaatgttggcgatgctgtgtgcacaatatcagcc
gccacttgtttccctgagcctttcatcaatgaagggaagcgtctggggtttgtccacagg
aactttgcagggactaggttctcggatcacgtagcccttctttctgtgttccaggcctgg
gatgatgccagaatgggtggcgaagacgcagaagttcgattttgtgagcacaaaaggcta
aacatggccactctgcggatgacatgggaggctaaagtgcagcttaaggatatcctcgtt
aattctggatttcccgaagagtgcttgatgacacagatgttcaataacttcgggccagat
aacaatctggatgtggtcatctccttgctgacatttggcttttatcccaacgtttgctat
cacaaggagaaaaggaagatcctcaccaccgaggggcgcaatgctttaatccacaaatcc
tctgttaactgtcccttcagcagccaagacatgaaatatccttcaccattctttgtgttt
ggagaaaagatcaggacaagggccatctcggcaaaaggaatgactttggtcagccctctt
cagctgattctgtttgggtcaaagaaaatcacttcagatggtgaacttattttacttgat
gaatggataaaactgaagatgcctcatgatgttgctgcctgtattgctgctctcagaaca
ggagtagaggcacttgttgtcgaagtaactaaagatcctgaatacataagacagatgggt
cctgtgaatgaacgcatgttgaacatcattcgtcaaatttcaaaaccctctgccgcaggg
atacacctaatggtgaacaactcaaggtttggggatggcccacggcctccgaagatggcg
cggtatgagggtggtgggggctacagaggccgaggaggctaccagggcgggggtggctac
ggaggagggggtggctacggaggaggtggctacggaagaggtggtggatatggaggattt
ggaaatggaggcggtggtggtggatacagaggagggggctatggaggagggggtggaggc
ttcagaggctcaggctatgggggatacaggggaggtggaggacacaggggaggagggggt
tacagaggtggtgcattttag
DBGET
integrated database retrieval system
