Lepisosteus oculatus (spotted gar): 102695723
Help
Entry
102695723 CDS
T07349
Symbol
rnf123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102695723 (rnf123)
Enzymes [BR:
loc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102695723 (rnf123)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102695723 (rnf123)
Multi subunit type E3
KPC complex
102695723 (rnf123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_RNF123
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
102695723
NCBI-ProteinID:
XP_015203425
Ensembl:
ENSLOCG00000013373
LinkDB
All DBs
Position
LG5:complement(41752125..41874805)
Genome browser
AA seq
1305 aa
AA seq
DB search
MSSKGGGTALSRRTYRLASDSDKPKVAGIVSEKLLSDYLHHVFPSSDKQSQPAAAFRKPL
TFQDLGAHLERLLSDGEPTDDNRDQAVDGRLGPSTVVLDHTSGFEGLLLVDDDLLGVIGH
SNFSSIRATTCVFKGKWTYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRV
RKWNVTTTNYGKSWAAGDIVSCLIDLDEGTISFCLNGQSLGAAFSNIKMGPGMAYFPAIS
LSFKESVAFNFGSRPLRYPVEGYMPLQNPPTADLLKAQKLLGYIKNVLSTRIDVQEGKLV
EKDSSAWQLQGEPTVLVTLAHVFNYFAPLMCKVYIVEDVLMNFLLSILEGGGSVDEHPLI
QQLLDLFWLLMEDYEVNECLKQLMMSLLRAYRFSPIIPDLGFQIHYLRLTTAILRHEKSR
KYLLSNVLFDVLRSVVFFFIKTPLRVKEAGLEELIPTTWWPSRFDKEGKDERESREESAE
ERLRRRAYERGCQRLRKRIEVVEELQVKILQLMLNNKDKGTGEASRYIFLNKFRKFLQEN
ASNRGNPTVLCPPEYMVCFLHRLITAVRSLWDEGKRKIPGCVSSEEAYVPPQLFYNGKVD
YYDLQRLGGLLSHLKKTLKDDLATKANIIIDPSEIQSTSMDDLDEDEDSGAAQRPFGAAA
MGAALARPSWLSSPTLGRANRFLSTAAVSLMTPRRPLAPPEKVKVRTLAVEQRTEEDIEG
SHGNDGLLLGRPPEEPEQPIAEKSLLEILDGIIMMYNLSVHQQLGKMVVVSDDVHEYAVA
LKDTEEKIARCPSRRHDILEELQKSQKVFAEKLNHLSRRLAWINATIYSKEKMLDVYWLL
QVCIRTIEHADNTGSLFAFTPEFYLNVAMNSYSALKNYFSPSNSMEELPGYEDTLTQLAA
ILAKHFADPRIVGTDIKDSLMQALASYVCYPQSLKAVERISEEQRVAMMKNLLAPYEQRP
WAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSLLLQRHMAELLSQD
KEMAASFLNSVLNQLNWAFSEFIGMIQEIQQAAERPERNFVDTRQLKVCATCFDLSVSLL
RVLEMTVTLVPEIFLDWTRPSAELLLRRLAQLLNQVLNRVTAERNLFDRVVNLRLPGLES
VDHYPILVAVTGILVRLLVDGDSQWVSRAGAVLLSDPCFQLHSIQHLLGDKEPPCAGAPL
PPGDRKHFSLHTYTDYISVEEQQKVEQMLAFLTEESKQAAASAAPTSEEDLCPICYAHPI
SAVFKPCSHKSCKACINQHLMNNKDCFFCKATITGVEDYNKPASS
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaaaggggggtggcactgcactgtcccgccgtacctacaggctggcctccgac
agtgacaagccaaaggtggcaggcattgtgagtgagaagcttctgagtgactacctacac
catgtcttcccctcctctgacaagcagagtcagccagccgcagccttcaggaagccactg
acatttcaggatttgggcgctcacctggagaggctgctgtctgatggagagcccacagat
gacaacagagatcaagctgtggatggtcgccttggcccctcgactgttgtcctggaccat
accagcggctttgaggggttgttgctggtagacgatgatctcctcggggtaattggccac
agcaatttcagctccatcagagccacaacctgtgtttttaaaggaaagtggacctacgag
gtgctcatttcctctcaggggttgatgcagatcggctggtgcacgctgaactgcaggttt
aaccaggaggagggagtgggcgacacacccgactcatatgcttatgatggaaacagggta
cgcaagtggaatgtcaccaccaccaactatggcaagtcttgggctgctggggacattgta
agctgtttgatagacctggatgaggggacaatatcattttgccttaatgggcagtccctg
ggcgcagccttcagtaacatcaagatgggcccaggcatggcctacttcccagcaatcagc
ctgtccttcaaagaatcagtggcgttcaactttggcagccgccctctccgatatcctgta
gaggggtacatgcccttgcagaacccacccaccgctgacctcctcaaagcacaaaagctt
ctgggatacatcaagaatgtgctgtccaccagaatagacgtgcaggaggggaagctggtg
gagaaggatagctcagcctggcagctgcagggggagcccacagtgttggtgacactggca
catgtcttcaactacttcgcccctctcatgtgtaaggtctacatagtggaagatgtcctt
atgaattttctgctgagtattttagaggggggtggctcagtggatgaacaccccctcatt
cagcagctcctggatctcttttggctgctgatggaagattatgaggtgaacgaatgcctg
aagcagctgatgatgtccctcctcagggcctacagattctctcccatcatccctgacttg
ggcttccagatccattatctgcgcctaacgactgctatccttcgacatgagaaatctagg
aagtaccttctaagcaatgtgttgttcgacgttctgcgctctgtggtattcttcttcatc
aagacccccttgcgggtcaaggaggccggcctggaggagctcattcctaccacctggtgg
ccaagtcgctttgacaaggaggggaaggatgagagggagtcaagagaagagagtgctgag
gaaagactgaggcgcagggcctatgagaggggctgccagcgcctgaggaagaggattgaa
gtggtggaggagctgcaagtgaagattctccagctaatgctgaataacaaggacaaaggg
acgggtgaagcctcccggtatatcttccttaataaattccgcaagttcttacaagagaac
gccagcaacagagggaatcctacagtgctgtgccctcctgagtacatggtgtgtttcttg
caccgcctcattactgctgtcaggagcctctgggatgagggcaaaaggaagatcccaggg
tgtgtgagcagcgaagaggcctacgttcctcctcagctgttttacaatggcaaggtggat
tactatgacctgcagagattgggcggccttctctcccaccttaagaaaaccctcaaagat
gacctggccaccaaagccaatatcataattgacccatcggagatccaatccacgtcaatg
gatgacctggatgaggatgaagacagtggtgcagcacagaggccattcggggcagctgca
atgggggcagccttggcgcggcccagctggctgagctcccccactctgggcagagctaac
cgcttcctcagcactgctgcagtcagcctcatgaccccacggcgaccccttgccccacca
gagaaggtcaaagtgcgcaccttggcagtagagcagaggactgaggaggacattgagggc
agtcatggtaatgatggactattgcttgggcgaccaccagaagagccggagcaaccaata
gctgagaagtccctcctggagatcttggatggtatcatcatgatgtacaacttgagtgtg
caccaacaactgggcaagatggtggtggtgtcagatgatgtccatgaatatgcggtggcc
ctgaaggacactgaggagaagattgctcgctgcccaagtagaagacatgacattctggag
gagcttcagaagagccagaaggtttttgctgagaagttgaaccacttgagccgcagacta
gcctggattaatgctaccatttactccaaagagaagatgctggatgtgtactggctgctc
caagtctgtatccgcaccatagagcacgccgacaacaccggctccctgtttgcattcacc
ccggagttctatcttaatgtggccatgaacagctacagcgcactcaagaactacttcagc
ccttccaacagcatggaggagctgccaggttatgaggacacacttacccagcttgctgct
atcttagccaaacattttgcagacccccgcattgtaggaacagatataaaggactctttg
atgcaggcactggccagctatgtgtgctatccccagtccctaaaagcagtggagagaatc
tcagaggaacagcgagtggccatgatgaagaacctgctggccccctatgaacagagaccc
tgggcacagaccaactggatcctggtgcgactttggaggggctgtggatttggctacagg
tacacacgattgcctcacctgttgaaaaccaaacctgaggatgcaaacctacccagcctg
cagaagccctgtccctcccttctgctccagagacacatggcagagctgttgagccaagac
aaggagatggctgccagtttcctcaacagcgtcctcaaccagctcaactgggccttctcc
gagttcataggcatgatccaggagatccagcaggctgcggaacgccctgagcgcaacttt
gtggacacgcgccagctaaaagtgtgtgccacctgcttcgacctgtccgtcagcctgctg
cgtgtgctggagatgaccgtaactctggtgccagaaatcttcctggattggacccgtcct
tctgcagaactgctgctgcggcgactagcacagttgttaaaccaagtgctgaaccgcgtg
accgcagagaggaatctctttgacagggttgtcaacctgcggctgccagggctggagagt
gtagatcactaccctatcctggtggctgtgactgggattctggtgcgccttcttgtggat
ggtgatagtcagtgggtgtccagagctggagcggtgctgctgtctgacccgtgtttccag
ctgcactccattcagcacctcctgggagacaaagagccaccctgtgctggggcacccctc
cctcctggtgaccgcaagcacttctccctgcacacctacacagactatatcagcgtggag
gaacagcagaaggtggagcagatgctggcctttctgacagaagagtccaagcaggcagca
gccagcgcagcacccaccagcgaagaggacctgtgtcctatctgctacgcccatcccatc
tctgctgtcttcaagccctgctcccacaagtcatgcaaagcctgcatcaaccagcacttg
atgaacaataaggactgctttttctgcaaggccacaatcactggagtggaggactacaac
aagccagcatcctcttag
DBGET
integrated database retrieval system
