Lepisosteus oculatus (spotted gar): 102696236
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Entry
102696236 CDS
T07349
Symbol
bre
Name
(RefSeq) BRCA1-A complex subunit BRE
KO
K12173
BRCA1-A complex subunit BRE
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102696236 (bre)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102696236 (bre)
03036 Chromosome and associated proteins [BR:
loc03036
]
102696236 (bre)
03400 DNA repair and recombination proteins [BR:
loc03400
]
102696236 (bre)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
102696236 (bre)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
102696236 (bre)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
102696236 (bre)
DNA repair and recombination proteins [BR:
loc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
102696236 (bre)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
Motif
Other DBs
NCBI-GeneID:
102696236
NCBI-ProteinID:
XP_006626398
Ensembl:
ENSLOCG00000017167
UniProt:
W5NKR1
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All DBs
Position
LG1:60829302..60940559
Genome browser
AA seq
386 aa
AA seq
DB search
MNSLSPEVALNRISPELRPLLSSVVRNGRVGLDSTSCLRITDLKTGCTSLTPGPCCDRFK
LHIPYAGETLKWDIIFNARDPELPPDFIFGEDAEFLPEPSELPHLVSWDAGDTECLLQLV
KELIQQYHQYQCQRLRESSRLLFEYDSLLEDPLYGRSMEVYAGHKNSWTGEFSARFLLKL
PVDFSNIPVYLLKDTALDPGEDVALLSVSFEDAEATQVFPKLYLSPSIEHALGGSSALHI
PAFPGGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFLSYFGMGVVEYDAEGFTKL
TLLLMWKDFCCLVHIDLPLYFPRDQPTLTFQSVYHFTSSGQLYSQVQKSYPYSPRWDGNE
MAKRAKAFFKSFIPQFQEGAFASGKL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcttgtccccagaggtggcgctgaaccgcatttcgccagagctgcggcccctg
ctgtccagcgtggtccggaacggccgtgtgggtctggactccacgagctgccttcgcatc
actgatctcaagacaggatgcacctccctgacaccaggcccctgttgcgatcggttcaag
ctgcacatcccctacgcaggagagactctcaagtgggacatcatcttcaacgcccgggac
ccggagctgcccccggacttcatttttggggaggatgccgagttcctgcccgagccctca
gaattaccccacctggtgagctgggacgccggcgacaccgagtgcctcctgcagctggtg
aaggagctgatccagcagtaccaccagtaccagtgccagcggctgcgggagagttcccgc
ctgctcttcgagtacgacagcctgctggaggaccccctctacgggcgcagcatggaggtc
tacgctgggcacaagaacagctggacgggggagttctctgcacggttcctcctgaagctc
ccggtcgacttcagcaacatcccggtctatctcctgaaggacacggctctggacccggga
gaggatgtcgccctcctgtccgtcagtttcgaggatgctgaagccactcaggtgttcccc
aagctctacctgtcccccagcatcgagcacgcgctgggagggtcctcagcactccatatc
ccagcattccccgggggcggctgcctcattgactatgtacctcaggtctgccagttgctc
accaacaaggtgcagtatgtcatccaaggctaccacaagcggagagagtacattgctgcc
ttcctgagttactttgggatgggtgttgtggagtatgacgcagagggcttcaccaagctc
accctgctcctcatgtggaaggacttctgctgcctggttcacatcgacctgcccctgtat
ttcccccgggaccagcccaccctcaccttccagtccgtctaccacttcaccagcagcggg
cagctctactcccaggtgcagaagtcctacccttacagcccccgctgggatggcaacgag
atggcaaagagggccaaggccttctttaagagcttcatccctcagttccaggaaggggcg
ttcgccagcgggaaactctag
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