Lepisosteus oculatus (spotted gar): 102696827
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Entry
102696827 CDS
T07349
Symbol
tiam1
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04530
Tight junction
loc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102696827 (tiam1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
102696827 (tiam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_2
PDZ_6
PH_11
Motif
Other DBs
NCBI-GeneID:
102696827
NCBI-ProteinID:
XP_006628312
Ensembl:
ENSLOCG00000009135
LinkDB
All DBs
Position
LG3:complement(18235262..18357458)
Genome browser
AA seq
1589 aa
AA seq
DB search
MGNVESQNGDHSFYGNDQGHLSRKHMSRSLRISSKQARRSRHASSGKVEHRNSETSTRSS
STPSIPQSLADSGLEPFNETNILGDLGSPIWVDSVAMNLRPASFHNESLVDPTVETVLTA
ASVPSMQESQKSRLFQGEATYIQRVNDGPRGNESFNFKKKRSKSADMWREDSLEFSLSDI
SQDHLTSTEEIIDASDEKDYNDCEQLQASPQGMESLDPNNRASSLDELCGQKSHSARDSR
NVFGKYCHNKGSREAGTCIEVTAEKTLLSSEDDGTSYGAYTLPCRRSHCLSEGVAILPAA
HPASMQGRRAQTTQDVTTGEGSEYADSGIDGVTAGADHKSRRSKAMSASFSVCSAAGSSM
FAGSDSGSSGAGEGVHGVYENFRRELEMSSSKTESLEEAGSAVSDERSSGTLSSPCQSDA
LLSAAQGTVRKAGVLAVKNFLVHKKNKKVEPAARRKWKHYWVSLKGCTLFFYETDGRSVI
EYNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTSSQTELENWITAIHST
CATAVARQHHREDTVRLLRSEIKKLEQKIDMDEKMKKMGEMQLSSVTDTKKRKTILEQIF
LWEQNLEQFQMDLFRFRCYLSSLQGGELPNPKRLLAFASRPTKLAMGRLGIFSVSSFHAL
VAARTESGVRRRTQAMSRSASKRKSRFSSLWGLDTTSKKKTKGRPSINQVFTDGVESVKT
SLDGMFEDAASESVKESEGSLKSLPQRNADNEIWVPDYLTPSWVCLPNDKPVLTIIQPED
STLDILEKVCKAHQLDPAKHYIRLKFLIENQVQFYNPKLEEDISDLLYKEIEICSKTTNL
VQFDRDESSTVGYGFSVSVVEEEGVQRLYITHVKDGGLASAKGLKSGDEILHLNGKDSSS
LILPDMKAAFSQSSLSLATSTVPAVEKHQLCSRPLRRSDGEDEQCTDIFSQSQEDILDDG
AVLCLGSPGDSLSLEDETEPSGEAVELKRSTEQVAAFCRSLHDMNPSESSPQSPDSSAPP
PATLRQLSDADKLRKVICELVETERTYVKDLNCLIERYLTPLQKESFLTQDELDVLFGNL
AEMVEFQVEFLKTLEDGTRLVPDLEKLEKVDQFKKVLFSLGGSFLYYADRFKIYSAFCAG
HTKVPKVLVKAKTDPEFKAFLDARNPKQQHSSTLESYLIKPIQRVLKYPLLLKELYSLTD
PESEEHYHLDVAMKAMNKVASHINEMQKIHEEYGTVFDQLIAEQTGEKKEVADLSMGDLL
LHTTVVWINPPASLGKWKKDPELAAFVFKTAVVFVYKECSKHKKKIGTSHRASISDERDP
FRFRHMISTDALQVRALASTDAEGSTVCEVVHVKSESEGRPERTFHLCCSSPESKKEFLK
TLHSILRDKQRRQLLKTESLPPNQQYVPFGGKRLCALKGARPVMNRAVSAPTRTLARRKL
VRNRFTIDTDVVFDSSSARDLSPQALPATDTDRWVEEQFDLHRYEDQEDVKETDILSDDD
EYCESVKGPAAEQDLEAPVKALSLDGDGDSEGEPEDAPQKAAESSHALKMAQLKKQCAVS
GLNGTIESGGEEVIWVRREDFVASGNGEI
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgtagaaagccagaatggggaccacagtttttatggtaatgaccagggtcac
ttgtctcgcaagcacatgtccagatcccttcggatctccagcaagcaggccagacgctcc
aggcatgcgtcttcgggaaaagtagagcacaggaattctgaaaccagtacccggtcaagc
agcacccccagcatcccacaatcccttgcagacagtggccttgagcccttcaatgaaaca
aatatcttaggagatcttggtagccctatttgggttgacagtgttgccatgaatctaagg
ccagcttcttttcacaatgagtcattagtagatcccactgtggaaacggtgctgacagca
gcttctgttcctagcatgcaagaatctcagaagagcagactgtttcagggggaggccact
tacatacaaagggtgaacgatggaccaaggggaaatgagagttttaactttaagaaaaaa
aggtctaaatctgctgatatgtggcgtgaagacagcttggaattttccctttcggacatc
agtcaggatcacttaaccagcacagaggagatcattgacgcatcggatgaaaaggactac
aatgactgtgaacagctccaagccagcccccagggtatggagtcactggaccccaacaac
agggccagctctctggatgagctgtgcggtcaaaagagccacagtgcgagagactctcgg
aacgtgtttggaaagtattgccacaacaaggggtcgcgggaggctggcacatgcatagag
gtgactgctgaaaagacgcttttgtcttctgaagatgatggtacctcatatggggcctac
accctcccctgcagaaggtcccactgcctgtcagagggcgtggccattctgccagctgca
cacccagccagcatgcaaggcaggagagcgcagactacacaggatgttacaacaggggaa
ggaagtgaatatgcagacagtgggattgatggagtaacagccggtgcagatcacaagtcc
aggcgctccaaggccatgtcggcctccttctccgtgtgctcggcggcgggcagcagcatg
ttcgcggggagcgacagtggcagcagcggggcgggcgagggcgtccatggggtgtacgag
aacttccgccgggagctggagatgagctcctctaagaccgagagcctggaggaggccggg
tcggcggtgagcgacgagcggagcagcggcaccctgagctccccctgccagtccgatgcc
ctgctgagcgccgcgcagggcaccgtgcgcaaggccggcgtgctggcggtcaagaacttc
ctggtgcacaagaagaacaagaaggtggagcctgctgctcgtcgcaagtggaaacactat
tgggtgtccctcaaagggtgcacactgttcttttatgagactgatggccgttctgtgatt
gagtacaacagtatcccaaagcatgcagtgtgggtggaaaacagcattgtacaggctgtt
cctgagcacccaaagaaggactttgtcttctgtctcagcaattctctgggggatgctttc
ttatttcagacttccagccagacggagctggagaactggatcacagccatccactccacc
tgtgccactgcagtggcccggcagcaccaccgggaggacaccgtcaggctgctgcggtcg
gagatcaaaaagctggagcagaagatcgacatggacgagaagatgaagaagatgggcgag
atgcagttgtcctcggtcacggacaccaagaagagaaagaccattctggagcagatcttt
ttgtgggagcaaaacctggaacagtttcagatggatctgtttcggtttcggtgttacctg
tcaagccttcagggaggggagctgcccaacccaaaaaggctcctcgctttcgccagccgg
cccaccaaacttgccatgggacgcctcggtatcttctcggtctcatccttccatgccttg
gtggcagcacgcactgaaagcggggtgagacgcaggacacaggcgatgtctcggtcagcc
agcaagcgcaagagcaggttctcctctctctgggggctggacactacctcaaagaagaag
acaaaaggacgacccagcatcaatcaggtgtttaccgatggtgtggagtcagtgaagaca
tccctggacggcatgtttgaagacgcagcaagcgaaagcgtgaaggaaagtgaggggtct
ttgaaaagcctcccccagcgcaatgcagacaatgaaatttgggtccctgactacctcact
ccttcctgggtctgcctccccaacgacaagccggtactaacaataatccagcccgaggat
tccacacttgacattcttgaaaaggtttgcaaggctcaccagctggatcctgccaaacac
tacatacggctgaagtttttaattgaaaaccaagtgcaattttataaccccaaactagag
gaagacatcagtgatttgctgtacaaggaaatcgaaatttgttccaaaactacaaacctg
gtccagtttgaccgtgatgagtcgtccactgttggttatggtttctctgtttctgttgtg
gaggaggagggtgtgcagaggttatacatcacacatgtgaaggatggcggattagcatct
gctaaaggtctaaaatcaggcgatgaaattctgcatctgaatggcaaagattccagcagc
ctcatcttgccagacatgaaggcggctttttcccagtcttcgctgtccttggccaccagt
acagtccctgctgtggaaaagcaccagctctgctcccggcccctgcgacgctcagatgga
gaggatgaacagtgcacagacatattttctcaaagccaagaagacatccttgatgatggg
gcagttctctgcctggggagcccaggagacagtcttagtcttgaggatgaaacggagccc
tctggtgaagctgtagaacttaagcggagtactgagcaggtggcagctttctgccgcagt
cttcatgatatgaatccttcagaatcctctccgcagagcccagactcctcagcccctcca
cctgccaccctgcgacagctctccgatgctgacaaattgcggaaagtcatctgtgagctg
gtggaaaccgagaggacctatgtcaaagatctgaattgccttattgagaggtatttaaca
cctttgcagaaggaaagctttctgacacaggatgagcttgatgtgctttttgggaacttg
gccgaaatggtagaattccaggtggaatttcttaaaacacttgaagatgggacaaggctg
gttcctgacttggaaaagcttgaaaaagtggatcagtttaaaaaagttctcttctctctt
ggaggctccttcctgtactatgcagatcgttttaagatctacagtgcattctgtgccggt
catacaaaagtcccaaaggttcttgtaaaagctaaaacagaccctgaattcaaggctttc
ctggatgcccggaatcccaaacagcagcactcctctacgctggagtcttacttgatcaag
cccatccagcgtgtgctgaaatatccactgttgctgaaggagctgtattctctgactgac
ccagagagtgaggaacattatcatctcgatgttgcaatgaaagccatgaacaaagttgca
agccacattaatgaaatgcagaagatccacgaagaatatggtaccgtttttgaccagctg
attgctgaacagactggtgagaaaaaagaggttgctgatctgtcaatgggtgatctactg
ctccacaccactgtcgtctggatcaacccccctgcttctttaggaaaatggaagaaggac
ccagaacttgctgcatttgtcttcaaaactgccgtcgtgttcgtttacaaagagtgctcc
aagcataagaaaaaaataggcacatctcacagggcctccatctcggatgagagagacccc
ttcaggttccgccacatgatttccactgacgccctccaggtccgcgctttggcaagcaca
gatgcggagggatccacagtgtgtgaggttgttcatgtgaagtcagaatccgagggcaga
ccagaaagaaccttccatctttgctgcagttctccagagagcaaaaaggaatttttgaag
acgctgcactcaattctgagagacaaacagcgtagacagctcctcaaaacggagagtttg
ccaccaaaccagcaatacgtacctttcggaggaaaacgcttgtgtgcccttaaaggagca
aggcctgtaatgaacagagcagtgtcggctccgacccggaccctggcgcggcggaagctc
gtgaggaaccggttcactatagacacggacgtggttttcgacagcagctctgccagggac
ctctccccgcaggcactcccagccacggacactgaccgctgggtagaggagcagtttgac
ctgcaccggtacgaggaccaagaggacgtgaaggagaccgacatcctcagtgacgacgat
gaatactgcgagtcagtcaaagggccggcagcggagcaggacttggaggcccctgtgaag
gcactgtcgctcgacggtgatggtgacagcgagggtgagccagaggacgctccccagaag
gctgcggagagttctcacgccctaaaaatggcccagctcaagaaacagtgtgccgtgtct
ggactaaacgggaccattgaaagtggtggtgaggaggtgatttgggtgcgtagggaagac
tttgtggccagtggaaatggtgaaatttga
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integrated database retrieval system
