Lepisosteus oculatus (spotted gar): 102697014
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Entry
102697014 CDS
T07349
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X2
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc00310
Lysine degradation
loc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102697014 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
loc03000
]
102697014 (prdm6)
03036 Chromosome and associated proteins [BR:
loc03036
]
102697014 (prdm6)
Enzymes [BR:
loc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
102697014 (prdm6)
Transcription factors [BR:
loc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102697014 (prdm6)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102697014 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
zf-C2H2_15
SR-25
Motif
Other DBs
NCBI-GeneID:
102697014
NCBI-ProteinID:
XP_006626999
Ensembl:
ENSLOCG00000008663
LinkDB
All DBs
Position
LG2:complement(27646809..27713762)
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AA seq
560 aa
AA seq
DB search
MLKPGEPSGSAFLKVDPAYIQHWQQLFPQSQPKSGAHNQIQPPERADISAESLRQRPTSI
SSTSSSSASTPSSSSSTSSISSLAGLTQLSVPQIALFGHSQCSEIHTPGITAQAKDLCLS
SNCKNDTRPKFKFTSEELDYYLYGQQRMEIIPLNNHTSDPNNRCDMCADNRNGECPMHGP
LHSLRRLVGTSSAVAAVAPPEIPEWLRDLPREVCLCTSTVPGLGYGICAAQRIPQGTWIG
PFQGVPLLLDKIQTGTLRNTRHLWEIYDQEGTLQHFIDGSEPGKSSWMRYIRCARHCGEQ
NMMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPASVMEAM
SRQETLQPFNKTGKPPSVALLRSMVFPHSPCTRSFSLLDKPGHGESGFNQMNAKNQRVLA
SPTSTSQLSTEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSE
LRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRH
QRMPNECKPITESTESIEVD
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaacccggtgagcccagcggatctgctttcttgaaggtggacccagcttacatt
cagcactggcaacagctgttcccacaaagccagccgaagagcggagcccataaccagatt
cagccgcccgaaagagcagatatttcggcagagagcctccgtcagcgtccgacctccatc
tcctccacctcatcgtcatccgcttcaaccccatcttcctcctcctcaacctcttcaatc
tcttcgctagcaggtctaacacagttgtctgtgccccagattgcactttttggacactcg
caatgctccgaaatccacaccccgggaatcaccgctcaagccaaagacctttgcttgtca
tccaactgtaaaaatgacacaagaccaaagtttaaatttacttctgaggagttagactat
tacctctatggacagcagagaatggaaataatccccttgaacaatcacaccagcgatccc
aataatcgctgtgacatgtgtgcagacaaccggaatggtgagtgccccatgcacggcccc
cttcattctctacgccggctggtaggaaccagcagcgctgtagcggctgtagcccctcca
gagattcccgagtggctgcgtgacctacctagagaggtgtgtctctgcaccagtactgtg
ccgggactcggttatggcatctgtgcagcacaaaggatcccccagggcacctggattggg
ccttttcaaggagttccccttctcctggacaagatacagactgggacattgaggaacaca
cgtcacctgtgggagatttatgaccaggaagggacattacagcactttatcgatggcagc
gagcccggcaagtcgagctggatgagatatatccgatgtgcaagacactgtggagagcag
aacatgatggtggttcaatatagatcgtgtatattctacagagcatgcatggatattccc
agaggaacagagctactcgtctggtacaatgacagctacacatccttctttggaatccct
cttcagtgcattgcacaggatgagaacttgaacgtcccagcatctgtcatggaagcgatg
tccagacaggagactcttcagcccttcaacaagaccggcaaacctccctcggttgcactg
ctccggtccatggtcttcccacactctccctgcacaaggagcttctctcttttggacaag
cctgggcatggagaatctgggtttaaccagatgaatgccaaaaaccagcgggttctcgcc
agcccaacgtctacaagccaactgagcacagagttcagcgactggcacctttggaagtgt
ggtcaatgctttaagactttcactcagcgaatcctccttcagatgcatgtgtgcacacag
aatcctgacagaccttaccagtgtgggcactgctcccagtccttctcccagccctctgag
cttcggaatcatgttgtcacccactcaagcgacaggccttttaagtgtggctactgtggg
cgcgcctttgctggggcgacaaccctcaacaaccacatccgcacacacaccggggagaag
ccattcaagtgtgagaggtgcgagcggagcttcactcaggccacccagctgagtcgacac
cagaggatgcccaatgagtgcaagccgataacggagagcacagaatcaattgaagtggat
taa
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integrated database retrieval system
