Lepisosteus oculatus (spotted gar): 102697036
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Entry
102697036 CDS
T07349
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04010
MAPK signaling pathway
loc04020
Calcium signaling pathway
loc04510
Focal adhesion
loc04540
Gap junction
loc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102697036 (pdgfrb)
04020 Calcium signaling pathway
102697036 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102697036 (pdgfrb)
04540 Gap junction
102697036 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
102697036 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
loc01001
]
102697036 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
loc04090
]
102697036 (pdgfrb)
Enzymes [BR:
loc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
102697036 (pdgfrb)
Protein kinases [BR:
loc01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
102697036 (pdgfrb)
CD molecules [BR:
loc04090
]
Proteins
102697036 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
Ig_4
V-set
Ig_5
VEGFR-1-like_Ig-like
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
102697036
NCBI-ProteinID:
XP_015205449
Ensembl:
ENSLOCG00000011097
UniProt:
W5MZ28
LinkDB
All DBs
Position
LG6:complement(30910128..30948402)
Genome browser
AA seq
1079 aa
AA seq
DB search
MKWGWMTDFNLAAFVTALLQLCQGGQGLKISPSGPELVLKQNSDITLTCSGSSEVIWKHN
DKQIHSTVKNGISSSNLTLQNVTWRQTGLYTCSESPSAFKEESIYIYVPDPDVWFLPSDL
NLVMKVGEEGTIPCFVTNPQINVTLYEKASQIPISGVYNPQEGFKANLGDNSYVCKGTLN
GEERESLAFHVHSLKVPDMIEVFINATKTELKKGEPLIVNCTVRGVELAYFTWDYPRKAA
NQFIEPITDIISDLGMEMRSILNISNATLEDSGRYHCNVSENVGGTEKDDEIIITVHDRG
FVKLNSTISNNLFGKLHESIELTVQIEAYPKPQVRWLKDNISLTGDLEEVSIDFRKMEET
RYETTLTLVRIRTEQRGHYTVHVSNEDGAGELTFELHVNVTPHIVDLSDYIPVGGGHAVV
CKAEGVPTPRIQWYSCDNIHKCTNRSDLWTLIATGSDNVSIQTNVSYNETRGVYLTKSRI
ALQDLQKIISLRCEARSAMGRKTRDVKLLSHLPHVLYSQVAVLATVLALVVIFIISIIVL
IAVWKKKPRYEIRWKVIESVSSDGHEYIYVDPMHLPYDSAWEVPRDSLVLGRTLGSGAFG
RVVEGTAYGLGHSQSTTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACT
KRGPIYLITEYCRYGDLVDYLHRNKHTFLQYYADKTRRDAEMCRNSTIESQGKSYVTLTS
ESDGGYMDMSKDDSTEYVPMQELTDNIKYADIEPSVYETPYQQDNYQTQGQERIDSAPVI
NESPILSYTDLVGFSYQVAKGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIM
HDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMSEL
FYSALKRGYRMSRPTHASEEVYEIMKKCWEEKYEKRPEFSYLVHAMGNMLSDSYKKRYNQ
VNESFFKSDHPAVAHTKPRMPGSQVSPITSPGTRQDAEGEEALASDNEYIIPIPDPKPEE
ACEESNDTEAENPPSTENLKEVSPASGSLETSITDPEEMGSSSSPEEEKTEPEVEESFL
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggggttggatgacagacttcaatttagcagcttttgtcacagctctcctacag
ctgtgtcaaggtggtcaaggccttaaaatttcaccaagtggcccagagttagtcttgaag
cagaactctgacatcactctgacgtgctcaggatcaagtgaggtgatctggaaacacaat
gacaaacaaattcattctacagtaaagaatgggatttcatctagtaatcttacactacaa
aatgtaacatggagacaaactggactatatacatgttctgaatccccatcagccttcaag
gaggaaagcatctacatttatgtaccagatccagatgtgtggttcctaccatctgacctt
aaccttgtgatgaaggtaggggaggaaggcaccattccctgctttgttaccaacccccaa
ataaatgtcaccttatatgagaaggcaagtcaaattccaatcagtggagtttacaaccct
caggagggcttcaaggcaaatttgggtgacaattcctacgtctgcaagggtacattgaat
ggtgaagagagggaatcccttgcatttcatgtgcacagtcttaaggtaccagacatgata
gaggtctttatcaatgccacaaagacagagttaaagaaaggtgaaccactaattgtgaac
tgcacagtacgaggagtggagttagcttacttcacctgggactacccacgcaaagctgcg
aatcaatttatagaaccaataaccgacataatttctgatctggggatggaaatgcgatcc
attctgaacatatcgaatgctactcttgaggattcaggaaggtaccattgcaatgtcagt
gagaacgtaggggggacagagaaagatgatgagatcataattacggttcacgaccggggg
tttgtaaagctgaattccaccatcagtaacaacctatttggaaaactacatgaaagcatt
gagctcactgtgcaaatagaagcctatcccaaacctcaagtgaggtggttgaaggataac
atcagcctgacaggagacttagaagaagtatctatcgacttcagaaaaatggaagagacc
agatatgagaccactttaactttggtacgtattagaacggagcaacgtggacattatact
gttcacgtgtctaatgaagatggtgcaggggagctaacctttgaactccatgtgaatgtg
acccctcatattgtggacctctctgactacatcccagtaggaggaggacatgcagtggtc
tgtaaggctgaaggtgtgccaaccccaaggatccaatggtacagctgcgacaacatccac
aaatgcaccaacagaagtgatctgtggacccttatcgctacaggctctgataatgtcagc
atacagacaaatgtgagctataatgaaacccgtggtgtttacctgaccaagagcaggatc
gcccttcaggacctgcagaagatcatttctttgcgctgtgaggccaggagcgcaatgggg
aggaaaacgcgcgatgtcaagctgctttctcatctgcctcatgtgctctattcccaggtg
gcagttttagctacggtcttagctcttgtggtaatatttataatttccatcattgtcctg
atagcagtgtggaaaaagaaacctcgctatgaaatccgttggaaggtgattgagtcagtc
agctcggatggccatgaatacatctatgtagacccaatgcacctcccttatgactcagcc
tgggaggtaccaagagacagccttgtcttagggcgtacattgggttctggagcatttggc
agggttgtagaaggaacagcctatggccttggtcattcccaatccaccactaaagtggca
gtaaaaatgctgaaatcaacagcaaggagaagtgagactcaggcgttgatgtcggagctg
aaaataatgagtcatttaggtcctcatctcaatattgtgaatctgctaggagcctgcaca
aaaagaggtcctatctatctaattacagagtattgccgctatggagacctcgtagactac
ctccacagaaataaacacaccttcctgcagtactatgcagataaaactaggagagatgct
gagatgtgtagaaatagcacaatcgagagtcaaggaaaaagctacgtaacattaaccagt
gagagtgatggaggatatatggacatgagcaaggatgactctacagagtatgtacctatg
caggaactgacagacaacatcaaatatgcagatattgaaccatctgtgtatgaaacacct
taccagcaagacaattaccagacacaaggtcaagagaggattgacagtgccccagtgatc
aatgagtcacctattctgagctatacagaccttgtggggttcagttatcaggtggctaaa
ggaatggacttccttgcatctaagaattgtgttcatcgcgacttggcagcaaggaacgtc
ttgatttgtgaggggaaactggtgaaaatctgtgattttggattggcacgagacattatg
cacgactccaactacatctctaaaggcagcactttcctgcctttaaaatggatggcacca
gagagcatttttcacaatctctacaccacactgagcgacgtctggtcttatggaatatta
ctgtgggaaatcttcactctggggggaaccccatatcctgacctccctatgagtgagctc
ttttacagcgccctcaaacgaggctacagaatgtccagacctactcatgcatctgaagaa
gtttacgaaattatgaaaaaatgctgggaggaaaaatatgaaaaaagaccagagttctcg
tatttggttcacgccatggggaacatgctgagcgacagctacaagaagaggtataaccag
gtgaatgagagcttcttcaagagtgatcaccctgctgttgcgcacacaaagccgagaatg
ccaggcagccaggtgtcgcctatcacctcgccggggacaaggcaagacgctgaaggcgag
gaagccctggcctctgacaatgagtacatcatccccatcccggaccccaaaccagaagag
gcatgtgaagaaagcaatgacacagaggcagaaaatcccccaagcactgaaaaccttaaa
gaggtcagtccagcttctggttccttagaaacatccatcacagatccagaagaaatgggc
tccagttcatctccagaggaggaaaaaacagagccagaagtagaggaaagtttcctgtaa
DBGET
integrated database retrieval system
