Lepisosteus oculatus (spotted gar): 102697890
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Entry
102697890 CDS
T07349
Symbol
cacna2d1
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04010
MAPK signaling pathway
loc04260
Cardiac muscle contraction
loc04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102697890 (cacna2d1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
102697890 (cacna2d1)
04261 Adrenergic signaling in cardiomyocytes
102697890 (cacna2d1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
loc04040
]
102697890 (cacna2d1)
Ion channels [BR:
loc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102697890 (cacna2d1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
Cache_3-Cache_2
Motif
Other DBs
NCBI-GeneID:
102697890
NCBI-ProteinID:
XP_015207698
Ensembl:
ENSLOCG00000015521
LinkDB
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Position
LG8:9107351..9344733
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AA seq
1112 aa
AA seq
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MDSYRISVLFLVLFSLLNNLSSTEPFPSQILIKAWVDKMQEELVTLAETASGVKHLIQIF
TDKRKLYSVETNNASQLVESAARNIEKLLLNRSRALETLATSAENFQMEHGWKHEFADDD
IVYYNAKDDLYSDTNKTDGRRRIKPDFKEDPAFKRRISYNHSAVHIPTDIYEGSTVVLNE
LSWTEALENIFKKNREEDPTLLWQVFGSATGLARYYPASPWKDSRNTASKIDLYDVRRRP
WYIQGAASPKDMLILVDVSGSVSGLTLKLIRTSVSEMLETLSDDDFVNVVSFNKEANYVG
CFHHLVQANVRNKKKLKDDVQNITAKGITDYKKGFKFAFEQLSEFNGSRAHCNKIIMLFT
DGGEERAEEIFKEYNPERKVRVFTFSVGQHNYDKGPIQWMACANKGYYYEIPSIGAIRIN
TQEYLDVLGRPMVLADKKAKQVQWTNVYLDALDLGLVITGTLPVFNKTEIKDNSGQTKHQ
NQLILGVMAIDVSLDDIKRLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKPVGLGIPKVL
TGIWKPVFQNPKFQEPVTLDFLDAELENDIKVQIRKDMIDGKKGERTIHTLVKSQDERYI
DRGDRTYTWAPVNGTDYSLAMVLPEYSLHYIRARIGDTITQAKSQLGPRVSESMQLENFN
ENGYTLIAPREYCKDLKPSENRTQFLMDFNEFIDRKTPNNPTCNAMLVNRLLLDAGITSE
LVQHWKKQSLTGVVARFVATDGGITRVYPKSAGEDWKESAETYEASFYKRSLDNDFYIFT
APYFNNSGSGESGFDSGILVSRAVDLTIDGKKMKPAVVGVKISIAEWMANFTNATIRKGC
NSEICGCEKNSKLVDCVILDDGGFLLMSNQDEYIDEIGWFFGEIDPILMTNLVNTSLYAF
NKSYDYQSVCDPDRGPKAAAGLRSVFVPTIADILNIGWWASAAAWSIVQQLFVSFTFPNF
LEAADTEEEQTAALSKESCITEQTQYYFDNNNKSFSGVLDCENCSRIYRAEKLPNTNLLF
LIVDAKETCPCSSTKPLIQAEQPSKGPDPCDLVHNPRYRKGPEVCFDNDENDEPICTTSR
ASTMASTPLFILLQVFMWCKGRIILTAVGSLV
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggattcttacaggatatccgtcctttttttggtactcttctccctgttaaacaatctt
tcttcaacggagccgtttccttctcagatattgatcaaagcttgggtggacaagatgcag
gaggagcttgttaccttagctgaaaccgcaagtggggtaaagcaccttatccagatcttt
acggataaaagaaagctctacagtgtggaaacaaataacgccagtcagctcgtggaaagt
gcagccagaaatatagagaagcttcttctcaacagatcaagggcactggagaccctagca
acatcagcagaaaatttccaaatggaacatgggtggaaacatgagtttgcggatgacgat
atcgtttattataatgcaaaagatgacctctattccgatacaaacaagacagatggacga
aggaggatcaaacccgatttcaaagaggatcctgcattcaaacggcgcatttcctataat
cactctgcagtccacattccgacggatatctacgaagggtccacggtggtgctgaacgag
ctgagctggactgaggcactggaaaacatctttaagaaaaacagagaagaggatcctact
ttactttggcaggtgtttggcagtgcgactggtctggctcggtattatccagcttctcct
tggaaggactcacggaacactgcgagtaaaattgatttgtacgatgttcgacggcgacca
tggtacatacaaggagcagcttcgccaaaggatatgttgattcttgttgacgtgagtgga
agtgtctctgggttgactctcaaactgatcaggacatcagtctcagaaatgctggaaaca
ctctcagatgatgattttgtgaatgttgtttctttcaataaagaagcgaactatgttggc
tgcttccaccatctcgttcaagctaatgttcgaaacaaaaagaagttaaaagacgatgtt
caaaatatcacagcaaaaggaataaccgactataagaagggtttcaagtttgcctttgaa
cagctttcagaatttaacggttcccgtgcacactgcaacaaaataattatgctcttcact
gacggaggagaagaaagggctgaagagatttttaaagaatacaacccagagaggaaggtc
cgtgtatttactttttctgttggtcagcacaactatgataaaggaccaatacagtggatg
gcctgtgcaaataaaggatattactatgaaattccttccattggagcaataagaatcaac
acacaggagtaccttgacgtgttgggaaggccaatggttttggctgataaaaaggccaaa
caagtacaatggacaaatgtctatcttgatgcgctggatcttggcctcgttatcacgggg
acactgccagttttcaataagactgagataaaagacaacagtggtcaaacgaagcaccag
aaccagctcattctgggagtaatggcaattgatgtgtctcttgatgatatcaagaggctc
acaccacgctttacaattggtcctaatggatattattttgccattgaccccaatggctat
gtattgcttcatcccaatctccagccaaagccagttggtctaggaatcccaaaggtttta
acgggaatatggaagcctgttttccagaaccctaaattccaggagccagtgaccttggat
ttcctggatgctgaactggagaatgatatcaaagtgcagatacgaaaagacatgattgat
gggaaaaagggagaacgtacaatacacaccttggtgaagtctcaggatgagagatacatt
gaccgaggcgacagaacatatacttgggcacctgtgaatggaacagattacagcttggca
atggtattacctgaatacagtttacactatattcgtgcaagaattggagacactattaca
caagctaaatcacaacttgggccaagggtctctgaaagcatgcagctagaaaactttaat
gaaaatggctacacactcatagcgcctagagagtactgcaaagacctgaagccgtctgaa
aacaggacccaatttcttatggacttcaatgaatttatagacaggaaaacaccaaataac
ccaacatgcaatgctatgctggtcaataggctcctcctagatgctggaattacatctgag
cttgtccagcactggaaaaaacaatctctaactggagtcgttgccaggtttgttgctacg
gatggagggatcacaagagtgtaccccaaaagtgctggggaagattggaaagaaagtgct
gaaacttatgaggctagcttctacaaaagaagcttggataatgatttctatatctttaca
gcaccttatttcaacaactcaggaagcggggagagtggctttgattctggcatcttggtg
agcagagcagttgatttgaccattgatggcaaaaagatgaaaccagcagttgtcggcgta
aagattagtatcgcagaatggatggcaaacttcacaaatgcaacaatcaggaaaggatgc
aatagcgagatatgtggctgtgaaaagaattctaagcttgtcgattgtgtgatccttgat
gatggtggatttctcttgatgtccaatcaggacgagtacattgatgagattgggtggttc
tttggagagatcgatcccattttgatgacgaaccttgtgaacacttctttgtacgccttt
aacaagtcctatgactaccagtctgtctgtgatcctgacagaggccccaaagctgcagct
ggcttgcgttctgtttttgttccaacaatagctgatatattaaatataggctggtgggct
tcggcagcagcttggtcgatagtacagcagctatttgttagctttacttttccaaatttc
ctggaagctgcggacacagaagaggagcaaactgcagctctttcaaaggagagctgtatc
actgaacagactcagtattactttgacaataataacaaatctttcagtggggtgctagac
tgtgaaaactgttccaggatataccgtgctgaaaagttaccgaacacaaacctattattc
ctgattgttgatgccaaggaaacctgtccatgttcttctaccaaaccattaatacaagca
gaacagccctctaaaggaccggatccctgtgatttagttcacaatccaagatacaggaaa
ggacccgaggtctgttttgataatgatgaaaatgatgagcctatatgcactacaagtcgt
gcctctaccatggcgtcaactcctctcttcattttactgcaagtgttcatgtggtgtaaa
gggaggattatactgactgcggtggggtctctggtttga
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