Lepisosteus oculatus (spotted gar): 102698314
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Entry
102698314 CDS
T07349
Name
(RefSeq) rho guanine nucleotide exchange factor 1-like
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04270
Vascular smooth muscle contraction
loc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102698314
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
102698314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102698314
Membrane trafficking [BR:
loc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102698314
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
Motif
Other DBs
NCBI-GeneID:
102698314
NCBI-ProteinID:
XP_015224252
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All DBs
Position
LG24:1616110..1640342
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AA seq
1123 aa
AA seq
DB search
MIIIIIKRQTVDDQYSAFNSIELVKKRPAHLMVFLQHVMLQFDCSPVLCYLHADLCKSLS
PKEMKKHFVELCNTYLDKVAVLKIQIPVHIAYELGEHKRMMGMTANERELSDVEAFPTQD
RIALEIKERNVAEQLLDKLADIHPTICPDEERCTAMFTAVVSYMKHLGVRTKSSDSKKSR
LFFKKKPKKPDEPSSKHKILSNLLRETSSWIGGGNVESRPSKTDSEGDKTSHKSNGRPSA
DPPTSSTRKPGSCSLTVVPDTSEGSQVTISVTNSPDSTHSDTAASSGRSDSQSLSDSADQ
SPGARGGSCAPDAPPPCDTPSEESAETEKKKPRWVSSGDCGRLLIPGAWHILTLTYSLRL
SRHLFVFFCSIFCLHSPLSFPSIFTSFPHPSFRHIPLSLCFFPHLSTSPPVPSPLSLFLI
PSSLSSLSHAVPLLLRLSPSLSPPLSCRVGGIKLGRSESLCVERRRSHRGSSRAKQNRSR
SDVDLQTAGTATGPPSPATSHPPNHRHAASSDSVAVQADQPQPGPVSAPAEECEPRTAEL
EQDPPNWRECIPPETSRTLNKRETKRQEVINELFLTEHAHVRMLTVLQNVFARPMERESI
MTSTELEAIFPNLEEIIEMHYSFYESLKRLRQESSFIVKAIGQTLLSRFSGAEGEWFQKL
SARFCSHQSYALDFIKGRQKKDPKFNTFIQEAESKPQCRRLQLKDIIPIEMQRLTKYPLL
LENIAKSTGQSASLPGQCSCTGVSSQCVCINPSLSQCSVPDVQALLLTDILVLLQKQDDK
MVLKCQSKSTTGVQEGKQMLSPIIKLGSVFLRDVATDRKAFYVIFTWDSGAQIYELVAQT
VSEMKNWTELITSAAADQKQAAVAAPVERKRFGSYVPPGNIPQSPTLHIPSPLSPTDNGA
ISLKDAHLSSTDRDKDSLLDGRGGASWASLLAANGIDPITLGQASEEKLANGALDEVHSL
KRMLVRSISLSEEPQSEISPVSENPPSLGPEGEEPSDQSGGAGDERRDTDSRQSPGVFLV
TEQTHCIKVSVAQPGSDSSCLCSEEGAAAEGRAERAGEDDSGPGQEECGISAPLLLSHDQ
VTTVERSLKLLEEKLRQLQGLEEEYYKLHKCLSKAFFSQQSLS
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgattattattattattaagagacagacagtagacgaccagtatagcgccttcaacagt
atagagctggtgaagaagcgacctgctcacctgatggtcttccttcaacatgttatgctg
cagttcgactgctcccctgtgctgtgttacctacatgctgacctctgtaagagtctgagc
ccgaaagagatgaagaagcactttgtggagttgtgcaacacctacctggacaaagtagca
gttctgaaaattcaaattcctgtgcatatagcctatgaactgggtgagcacaagaggatg
atgggaatgactgccaatgagcgggagctgtcagacgttgaggccttccctacacaggat
cgtatcgcactggagattaaggagcggaatgtggccgagcagctgctggacaaactggcc
gatattcatccaacgatttgccccgatgaagagagatgcacggccatgtttactgctgtt
gtctcctacatgaagcacctgggtgtcaggaccaagtcctccgacagcaagaaatcccga
ctcttcttcaagaagaagccgaagaagcctgacgagccctcctcgaagcacaagatcctg
tccaacctcctgagggagacgtcgagctggatcgggggaggcaatgttgaaagcagaccg
tctaaaacggacagtgaaggcgacaagacgtcccacaagtctaacggccgaccctctgct
gacccccccacctcttccacccggaaacctgggagctgcagcctgactgtggtgcccgat
acaagcgaggggtcacaggtcaccatcagcgtgaccaacagtccagactccacccacagc
gacaccgctgcctccagtggacgctctgactcccagtctctcagcgacagtgcagaccag
tccccaggggcgagggggggctcttgtgctccagatgcaccccctccctgcgacaccccg
tctgaggagagtgctgaaacagagaagaagaaaccaaggtgggtgtcttctggtgactgt
ggacggctgttgatccctggggcctggcacatactgacactcacctactctctccgtctc
tctcgccacctctttgtcttcttctgctccatattctgtttacattctcctctatccttc
ccctcaatcttcacctccttcccccacccttcattccgccatatccctctctccctctgt
ttctttccccatctctccacctccccccccgtcccttctccactctctctctttctcatc
ccatcctctctctcctctctttctcatgctgtgcctctcctcctccgtctgtctccctcc
ctctctccgcccctctcctgcagggtgggaggaataaagctgggccgcagcgagagcctg
tgtgtggagcgccgccggtcccatcgcggctcgtctcgggcgaagcagaatcgctcccgc
agcgacgtggacctgcagacggccggcacggccaccggccccccttctccggccaccagc
cacccccctaaccacagacatgcagcctcctcggacagcgttgcggtgcaagcagaccag
ccccagccgggccctgtcagcgcgccagcggaggagtgcgagccccgcacagccgagctg
gagcaggacccccccaactggagagagtgcatcccgccggagacatcgaggaccctgaac
aagagggagaccaagaggcaggaggtcatcaatgagctgttcctgacggagcacgcccac
gtccggatgctgaccgtgctgcagaacgtcttcgcccggcccatggagcgcgagtccatc
atgacctcgacggagctggaggccatcttccccaacctggaagagatcatcgagatgcac
tattccttctatgagagcctgaagaggctgcggcaggagagcagcttcatcgtcaaggcc
atagggcagaccctgctgagccggttcagtggagctgagggggagtggttccagaagctc
tcggcccggttctgcagtcatcagtcttacgcgctggacttcattaagggccggcagaag
aaggaccccaagttcaacactttcatacaggaggcagagagtaaaccacagtgtcgacgt
ctccagctgaaggacatcatccccattgagatgcagagactgactaagtatcccctgctg
ctggagaacattgccaagagcactggtcagtctgcgtctctcccagggcagtgttcatgt
actggagtgtccagtcagtgtgtctgtattaacccctctctctctcagtgcagtgttcca
gatgtccaggcgctgcttctcactgatatcctggtgctgctgcagaagcaggatgacaag
atggtcctgaaatgtcagagcaagagcaccactggagtccaggaggggaagcagatgctc
agtcccatcatcaaactgggctctgtcttcctcagggatgtggctactgaccgcaaggcc
ttctacgttatcttcacctgggacagtggggctcagatctacgagctggtggcccagacc
gtgtcggagatgaagaactggacagagctgattacatctgcagctgctgatcagaagcag
gcagctgtggccgcccctgtggagaggaagagattcgggagttacgtgccccctggaaac
atcccacagagccccaccctccatatcccgtctcccctcagccccacggacaacggagcg
atctcactgaaggatgcgcacctgagcagcaccgacagagacaaggacagcctgctggac
gggaggggcggggcctcgtgggcatctcttctcgcagccaatggcattgatcccatcact
ctaggacaagcctccgaggagaagttagccaatggggctctggatgaagttcactctctt
aagcggatgcttgtgcgtagcatcagcctgtcagaagagccccagtcagaaatctcacct
gtgtctgagaatccccccagtcttgggccagagggggaggagcctagtgaccagagtgga
ggggcaggagatgagcgtcgtgacactgacagccgccagtctccaggtgtgttcctggtc
actgagcaaacacactgtatcaaggtgtcagtggctcagccagggagtgattccagttgt
ctgtgctcagaagagggcgccgccgcggagggacgagcagagcgggcaggcgaggacgac
agcgggccgggtcaggaggagtgtggcatcagtgccccgctgctcctgtcacatgatcag
gtgaccacggtggagcgcagcttgaagttattggaggaaaagctgcgacagctgcagggt
ctggaggaggagtattacaagctgcacaagtgtctgtccaaagcctttttctcacagcag
agtctctcctag
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