Lepisosteus oculatus (spotted gar): 102698776
Help
Entry
102698776 CDS
T07349
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102698776 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
loc04990
]
102698776 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
loc04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
102698776 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF_3
EGF
hEGF
FXa_inhibition
Plasmod_Pvs28
EGF_2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
102698776
NCBI-ProteinID:
XP_015218482
Ensembl:
ENSLOCG00000016686
LinkDB
All DBs
Position
LG16:16612027..16712669
Genome browser
AA seq
1704 aa
AA seq
DB search
MAWVRWNILLSIGLFISPAFTSTDKGELRRYTTYVLQPGQRGPDRVSSVSRTDGVGQRRS
YNVEVTANFGGQVRTRRMGNQASPSGLLRQQPQFTQQPRHASHSAIPAVHQGHQIQISGV
NVCGGQCCHGWSKGPGSLRCTKPNCVPPCQNGGMCLRPQLCVCKPGTKGKACEQKTLPST
PTMSGNGHNAVVPQRPIPQQASPRGPAQGLPASSAAQMTLAVKQQPIPQQFRPPLTMTVH
QSSTQQFAIKPKYYQTHKVQTGAQPPERAIPLTMAHSALHVGNHTGRIKVVFTPTICKMT
CSGGKCHNSCEKGNTTTIISENGHAADTLTAPNFRVVVCHLPCMNGGQCSARDKCQCPPH
FTGKFCQIPVQNGHHRHPSQQYQTHQQHQQVSLSHSQSSQVHSTHTLPLTFGGQSGVQVK
LPPNVVNIHVKHPPEASIQIHQVSQLDASGQQVKGSQSGQYTYHGETVQNGAQQGHGVIY
PSQQNIIHHYPVTSKSQLGRCFQETTGAQCGKALPGLSKQEDCCGTVGTSWGFNKCYKCP
KKQSIPLTGSRHAIDCPKGYKKINTTYCQDINECQLQGVCPNGECLNTIGSYRCFCKAGF
RPDPTLSTCIPDTPMVHEEKGPCFRFVSAGKQCMHPVSVQLSKQLCCCSVGKAWGPHCDK
CPIPGTAAFKEICPGGMGYTVTGTYRNPSHRHQPDSGTKTAVGQTIPLPPPAPLPTQPRP
VEALSSTERLRSEPAAGEVVTAAPEQELVTLGFDNRSVVEPGQPQLSPGISTISLDPSFP
VLVEKTSPPPPVEVAREASTASASQGLGESQVSEVDECSVNPMICGPGFCTNQPEGYSCV
CDDGFQLNEENTTCVDVNECVEGLYVCYNGRCENTEGSYMCVCQLGFLLNEEGTECTDID
ECLIPNVCQDGYCINTEGSFTCRHCERGYKMNRRGECGDINECLDARICPAGRCLNTPGS
YECVPCPDGHEGRGEQCVDINECLNKSLCVNGKCSNLEGSYICRCNKGYELSRNGKFCTD
VDECQDEEVCARGHCRNTEGTFICTCGSGFRISPAGDQCEDVDECQEFREACGEVGQCIN
SMGSYQCTCPDGFQVVNSTRCQDVDECLDDSELCGPYGECFNTQGSFHCICERGFAAAED
SHSCEDVDECSDGTKCHFGFCANTEGSYRCECSAGYRLHAANETCLDIDECEEDSGVCGT
WRCENSQGSYRCLVDCPPGYTEEPSGICVDVDECAANGTLCGSHGFCENTAGSFRCLCDR
GFQEPQESYGCVDVNECELLSGVCGEALCENVDGSFLCVCPHQNEEFDQMTGQCLSTPAA
TVPGVGRKECYYNLKNENLCEHVLNPSITREECCCTMGEGWGDNCEFFPCPDAGTDQFSE
MCPAGRGLIPTADSHYGADKFEDVDECAMFAEEICKDGFCLNTHGSFECYCKHGLYYDVV
KQQCVDFDECEDESSCIDGICLNSEGSYTCLCTPPMVLDSSGKRCIGAPEPGEHRGQGVV
FQDVCWQTIVEGNTCNNPLPGRKTTFAECCCLYGEAWGMECAFCPMKNTADYTTMCNLPG
PGERRAYGQDALTPFQPGFPVPGLEYDSPPHDSQFLPMYDDEEHQYDAFEGLRAEECGVL
NGCENGRCVRVQEGYTCDCFDGYSLDLAKMACVDVDECSELNNKMSLCKNAKCTNTQGSY
RCLCLPGFVHSDKPNYCVAADELE
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggcttgggttagatggaacattctgctttctataggtttatttatttcaccggcgttc
acctccacagacaagggcgagttgaggagatacaccacctacgtgctgcagccaggacag
aggggcccggacagagtgagctcggtttcgcggacagacggtgtcgggcagcggcgctct
tataacgtggaagtgacggccaacttcggcggccaagtccggacgcgcagaatgggaaac
caggcgagccccagcgggctgctccgacagcagcctcagttcacgcagcagccccggcat
gcaagccacagcgccattcccgctgtccaccagggccaccaaatccaaatatcgggtgtg
aatgtctgtggagggcagtgctgtcacggctggagcaaggggcccggctcgctgaggtgc
accaagccgaactgcgtgccaccgtgccagaacggaggaatgtgtctacggcctcagctc
tgcgtctgcaaaccaggaacaaaggggaaagcctgcgagcagaagaccctgccttcaacc
cccaccatgtccggcaacggccacaacgccgtggtaccgcagagaccgattccccagcag
gcctccccccgcggcccggcccagggcctcccggccagctctgcggcccagatgaccctg
gcagtgaagcagcagcccattcctcaacaattccgacctcctctgaccatgacggtgcac
cagagctccacacagcagtttgccatcaaacccaagtactaccagactcacaaggtccag
actggagcccagccgcccgagagggcgatccccctgaccatggctcacagtgcgcttcac
gtggggaatcacaccggccgcatcaaggtggtcttcacccccaccatctgcaagatgacc
tgcagcgggggaaagtgccacaacagctgtgagaagggaaacaccaccaccatcatcagc
gagaacggccacgctgcggacaccctcactgcacccaacttcagagtcgttgtctgccac
ctcccctgcatgaatggagggcagtgcagcgcccgggacaagtgccagtgtccgccacac
ttcaccggcaagttttgccagatcccagtgcagaacgggcatcacagacacccctcccag
cagtaccagacgcaccagcagcaccagcaggtgtccctcagccacagccagagctcgcag
gtccactccacgcacacgcttcccctgacctttggaggacagagcggtgtgcaagtgaag
ttacctcccaacgtcgtgaatatccacgtcaagcacccccctgaagcctctatccagatc
caccaggtctcccagctggacgccagtggacagcaggtcaaaggctcgcagtctggccag
tacacgtaccatggggagacagtgcagaatggcgcccagcagggccacggcgtcatctac
cccagccagcagaacatcattcaccattacccagtcacctccaagagccagctgggacgc
tgcttccaggaaaccacaggagcccagtgtggcaaagctcttcccgggctctccaaacaa
gaagattgctgtggaactgtgggcacgtcctggggattcaacaagtgctataaatgtccc
aaaaaacaatccattcctttgacaggatcaagacatgcaatagactgccccaaaggatac
aaaaagatcaacaccacctattgccaagatatcaacgagtgccagctccagggagtctgt
ccgaacggagaatgcctgaacaccatcggcagctacaggtgtttctgtaaggcgggcttc
aggccagaccccacgctcagcacttgtattcccgatactcctatggtccatgaggagaaa
ggcccttgtttccgatttgtcagtgctggaaagcagtgcatgcacccagtgtctgtgcag
ctcagcaagcagctctgctgttgcagcgttggcaaggcctgggggcctcactgtgacaaa
tgtcccattcccggaacagcggccttcaaggagatctgccctggtgggatgggttacaca
gtcacaggcacctacagaaatcccagccacagacaccagcctgactccggcaccaagacc
gccgtgggccagacgatccccctgcccccccctgcccctctgcccacgcagcccaggcca
gtggaggccttgagctccacagagaggctccgctcggagcctgcagcaggagaagtagtc
acagcagcacctgaacaggagcttgttactcttggtttcgataatagatcagttgtagaa
cctggccaaccccagttgtctcctggcatttcaaccatcagtctggatcccagctttcca
gtgctggtcgagaagacctcgcccccgccacccgtggaagtagcccgagaggcgtccact
gccagcgccagtcagggcctcggggagtcgcaggtgtcagaagtggacgagtgctcagtg
aaccctatgatctgcggacctgggttctgtaccaaccagcccgagggctactcctgcgtg
tgtgatgatggctttcagctgaatgaagagaatacgacctgtgtagatgttaacgaatgc
gtggagggcttgtacgtctgttacaatggccgctgtgagaacacggaagggagctacatg
tgtgtgtgccaactgggattcctcctgaacgaagaagggacagagtgcactgatatagac
gaatgtttgattcccaatgtgtgccaggatggttactgcatcaacacggagggttcgttc
acatgtcgacactgcgagaggggctacaagatgaacagaagaggggaatgtggagacatc
aatgaatgcctggatgcgaggatctgtcccgcggggcgctgtctcaacactcccgggtct
tacgagtgcgtcccgtgtcctgacggtcacgagggccggggcgagcagtgtgtggacatc
aatgagtgtctgaacaagtcactgtgtgtcaatggcaagtgttccaaccttgaaggatcc
tacatttgcagatgcaataaaggatatgagttgagtcgaaatggcaaattttgcacagat
gttgatgaatgtcaggatgaggaagtctgtgccagggggcattgtaggaatacagaggga
acgttcatctgcacctgtggctctgggttcaggatttcacctgctggtgaccagtgtgaa
gatgtggatgagtgccaggagttcagggaggcctgtggagaagttggccagtgcattaat
agcatgggatcataccagtgcacatgcccagatggcttccaagtggtcaacagcactagg
tgtcaagatgtcgacgagtgcctggacgactccgagctgtgtggcccctatggggagtgc
ttcaacactcagggatccttccactgcatctgtgagcgggggtttgctgcagctgaggat
tcacactcctgtgaagatgtggatgaatgttcagatggtaccaaatgccattttggtttc
tgtgccaacacggagggctcctatagatgcgaatgctctgcaggctatcgcctacatgct
gccaatgagacttgccttgatattgatgagtgtgaggaagacagcggtgtctgtgggacg
tggcgctgtgagaattcccagggctcgtacaggtgcctcgtggactgtcctccaggctac
actgaagagcccagtgggatctgtgtcgatgtggacgagtgcgctgcgaacggcacgctg
tgcggcagccacggcttctgcgagaacaccgccggctccttccgctgcctgtgcgaccgg
ggcttccaggagccgcaggagagctacggctgtgtggacgtgaacgagtgcgagctgctg
agcggggtgtgtggagaggcgctgtgtgagaacgtggacggctccttcctgtgcgtgtgc
ccccaccagaacgaggagttcgaccagatgacggggcagtgcctctccacgcctgcagcc
accgtcccaggggttggcaggaaggaatgctactacaatctgaagaacgagaacctgtgc
gaacacgtcctgaaccccagcatcaccagggaggagtgctgctgcaccatgggggaaggc
tggggggacaactgcgagttcttcccctgccctgacgcaggcacagatcagttttccgaa
atgtgtcctgcaggaaggggtctcattccaactgcagactcgcattatggggcagacaaa
tttgaagatgttgatgagtgtgctatgtttgctgaagaaatctgtaaggatgggttctgt
ttaaacacacatggaagttttgagtgttactgtaaacatggcttgtattacgatgtagta
aagcaacaatgtgtggattttgacgagtgtgaagatgagtccagctgtatagacggaata
tgtctgaactcagaagggtcctacacctgcctctgcacgccccccatggtcctggattcc
agtgggaaacgctgcattggagcaccagagcctggtgagcacaggggccagggcgtggtg
ttccaggatgtgtgctggcagaccattgtcgagggcaacacctgcaacaacccgctgccg
ggaaggaaaaccaccttcgccgagtgctgctgtctgtacggcgaggcctggggcatggag
tgcgctttctgtcccatgaagaacacagcggactacaccaccatgtgcaacctgcccggg
cctggcgagcgccgtgcatacggacaggacgccctgacgcccttccagcccggcttccct
gtgccagggctggagtacgactcgccgccccacgattcccagtttctgcccatgtatgac
gacgaagaacaccagtacgacgccttcgaggggctgagggcggaggagtgcggcgtcctg
aacggctgcgagaacggccgctgcgtgcgggtccaggaaggctacacctgcgactgcttc
gacggctactccctcgacttggccaagatggcctgcgtcgatgtcgacgagtgctccgaa
ctcaacaataaaatgtcgctctgcaagaacgcaaagtgcaccaacacgcagggctcgtac
cggtgcctgtgtctgccagggttcgtgcactcggacaagcccaactactgcgtggccgcg
gacgagctggagtag
DBGET
integrated database retrieval system
