KEGG   Leishmania orientalis: 92361329
Entry
92361329          CDS       T10351                                 
Symbol
LSCM4_05455
Name
(RefSeq) hypothetical protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
loi  Leishmania orientalis
Pathway
loi03420  Nucleotide excision repair
loi04120  Ubiquitin mediated proteolysis
loi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:loi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    92361329 (LSCM4_05455)
   04120 Ubiquitin mediated proteolysis
    92361329 (LSCM4_05455)
  09124 Replication and repair
   03420 Nucleotide excision repair
    92361329 (LSCM4_05455)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:loi04121]
    92361329 (LSCM4_05455)
   03400 DNA repair and recombination proteins [BR:loi03400]
    92361329 (LSCM4_05455)
Enzymes [BR:loi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     92361329 (LSCM4_05455)
Ubiquitin system [BR:loi04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   92361329 (LSCM4_05455)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     92361329 (LSCM4_05455)
   Cul2 complex
     92361329 (LSCM4_05455)
   Cul3 complex
     92361329 (LSCM4_05455)
   Cul4 complex
     92361329 (LSCM4_05455)
   Cul7 complex
     92361329 (LSCM4_05455)
   Cul8 complex
     92361329 (LSCM4_05455)
   Cul9 complex
     92361329 (LSCM4_05455)
DNA repair and recombination proteins [BR:loi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      92361329 (LSCM4_05455)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      92361329 (LSCM4_05455)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 PHD_NSD zf-RING_16 zf_RING_Vps8_fungal zf-RING_11
Other DBs
NCBI-GeneID: 92361329
NCBI-ProteinID: XP_067062963
UniProt: A0A836KKV9
LinkDB
Position
24:<642518..>642877
AA seq 119 aa
MSAEPSAASATASNAAPSSALMPGGQQLFTVEEFYPVYFSAWERETGLCSICCNQVEGPC
VVCQSNAEATSAECSITWGECGHAFHTHCIEKWLKTRPVCPLDNKEWKDRSDWNTSAAV
NT seq 360 nt   +upstreamnt  +downstreamnt
atgtcagccgagccttccgctgcctctgcaactgcttctaatgcagcgccgtcatcagca
ttgatgccgggtggccagcagctcttcacagtggaagagttttacccagtgtacttctcg
gcctgggagcgcgagacgggcctgtgcagcatctgctgcaaccaagttgaagggccgtgc
gtcgtatgccaaagcaacgcagaggccacttcagcggagtgcagcattacgtggggtgag
tgcggccacgcttttcacacccactgcattgagaaatggttgaagacgcggccggtgtgc
ccgctcgacaacaaagagtggaaggatcgctcagactggaacacctccgccgctgtgtag

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