Candidatus Lokiarchaeum sp. GC14_75: Lokiarch_25730
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Entry
Lokiarch_25730 CDS
T04015
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
loki
Candidatus Lokiarchaeum sp. GC14_75
Pathway
loki03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
loki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Lokiarch_25730 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
loki03400
]
Lokiarch_25730 (pdg)
Enzymes [BR:
loki01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Lokiarch_25730 (pdg)
DNA repair and recombination proteins [BR:
loki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Lokiarch_25730 (pdg)
Prokaryotic type
Lokiarch_25730 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
RecR_HhH
DNA_pol_viral_N
Motif
Other DBs
NCBI-ProteinID:
KKK43589
LinkDB
All DBs
AA seq
225 aa
AA seq
DB search
MKYKNVLDKIEEVLEGKAHLDELAKEKQDPFKILISTILSARTRDSNTRIATERLFSKYN
TPKLIANADIEKLQDLIRASGFYKVKAARIKEVSKILIGDHGGIVPDDFDELINLPGVGA
KTANCVLVYAFKIPAIPVDVHIHRIMNRLQWVNTKKPEETEKALKILIPKKYWLDINRII
VRFGQQICLPIRPKCDFCPINDICPKDFSFEREKRKKKKKKSILT
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaaatataaaaatgttctagacaagattgaggaggttttagaaggaaaagcacattta
gatgaattagctaaggaaaaacaagatccttttaaaattttgatttctacaatattgtct
gctcgcacaagagattctaacactcgaatcgcaactgaaagattattttcgaaatacaat
acaccaaaattaattgctaatgcggatattgaaaagctccaagaccttataagagcctct
ggattctacaaggtaaaagcggctcgaataaaagaagtttcaaagattcttataggggat
catggtggaattgttcctgatgattttgatgaactcattaatctaccaggtgtgggagct
aaaaccgctaattgtgtattagtgtatgctttcaagattcctgccatccctgtggacgtc
catattcaccgaataatgaataggttacagtgggtaaatactaaaaaaccagaagaaaca
gaaaaagcgctaaaaatattaattccaaaaaaatattggttagatatcaatagaataatt
gtgagatttggtcaacaaatttgtttaccaattcgtcctaagtgtgatttttgtcccatt
aatgatatttgtcctaaagatttttcatttgagagagaaaagagaaagaaaaaaaagaaa
aagtctattctcacttga
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