Lactobacillus panisapium: GYM71_05060
Help
Entry
GYM71_05060 CDS
T07602
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lpai
Lactobacillus panisapium
Pathway
lpai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GYM71_05060 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpai03400
]
GYM71_05060 (nth)
Enzymes [BR:
lpai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GYM71_05060 (nth)
DNA repair and recombination proteins [BR:
lpai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GYM71_05060 (nth)
Prokaryotic type
GYM71_05060 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
DUF1512
RecR_HhH
DUF6792
Motif
Other DBs
NCBI-ProteinID:
QYN52818
LinkDB
All DBs
Position
complement(1076316..1076942)
Genome browser
AA seq
208 aa
AA seq
DB search
MPEKLLSTAEARKVLRAINEMYPDAKSELIWDNKFHLLCAVLMSAQTTDKMVNRIMPKFI
ADYPDPSSLAQASITDIEHHISKIGLYHSKAKHLKETAQILVDKFAGQIPEDKKTLVTLP
GVGEKTANVVLADGFGVPAIAVDTHVSRISKRFHIVPQNAKPLEIEKRLEEILPKSEWIH
THHAMILFGRYSMTARDKEDPYSYLKKQ
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaaattattaagtacagcagaagcaagaaaagtcttgcgtgccataaacgag
atgtaccctgatgcaaaaagtgaattgatttgggataataaatttcatttactttgcgcc
gtgttaatgagtgctcaaacgactgataaaatggttaacagaatcatgcctaaatttatt
gcggattatccagatccaagctctttagcgcaagcatcaattaccgatattgagcaccat
atttcaaaaattggcctctatcattctaaggccaagcacttaaaagaaaccgcccaaatt
ttggtggacaaatttgccggtcagattcctgaagataagaaaacgttagtgacattgccc
ggagtgggcgagaagactgcaaatgtagttttagctgacggttttggtgtaccggctatt
gctgttgatacacatgtttcccgaatctcaaaaagatttcatatcgtaccgcaaaatgct
aagccacttgaaattgaaaaacgattagaagaaatattaccaaaaagtgagtggatccac
actcatcacgcaatgattttatttggtcgttattcaatgacagcaagagataaagaagat
ccatattcatatttgaaaaaacaataa
DBGET
integrated database retrieval system
