Lysinibacillus pakistanensis: GDS87_04025
Help
Entry
GDS87_04025 CDS
T06280
Name
(GenBank) AcrB/AcrD/AcrF family protein
KO
K18138
multidrug efflux pump
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak01501
beta-Lactam resistance
lpak01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GDS87_04025
01503 Cationic antimicrobial peptide (CAMP) resistance
GDS87_04025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpak02000
]
GDS87_04025
01504 Antimicrobial resistance genes [BR:
lpak01504
]
GDS87_04025
Transporters [BR:
lpak02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GDS87_04025
Antimicrobial resistance genes [BR:
lpak01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GDS87_04025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
NET2A_C
Motif
Other DBs
NCBI-ProteinID:
QGG50157
LinkDB
All DBs
Position
904470..907523
Genome browser
AA seq
1017 aa
AA seq
DB search
MNISDFSIKRPVFTIVTMLFVIILGGVSLLKIPITLIPELHPPIGVVVTSYPGASPAEVN
EKITKPLETTLATLPGIKKLQSTSQEGSNLIVLEFNWSTNIEDVQLDILQRIDMTPLPSD
AEKPSFLKFDPSQFPIIQLSLRAENDDVDVRLLAEDLEKELRRTAGVASVNVSGKLVEEV
QLTLDESKLVEKGLTQADIIQIIQSNNVSLPGEPVLTNDGKMLTTRILSTLSTPEDIADL
IVSVNPLDGKALTVGEVATVERVEQISMTTTRANNHPAVLMSVLQESGANTAEVSKAFQD
ALNELLAKKQYQGIVADVLTDQGNYVDLAISNIGSSLLLGGLFAMFVLFVFLRSVKSPII
IGIAIPYSVIVTFVLMYFANFSLNIMTLGALALGIGMLVDNAIVVIENIERHLGIGKSPI
VAAKEGTKEVALAITASTLTTIAVFIPVMFIEGLIGQIFTEFALTISFSLIASLVVALTV
VPMLASRLLKIKAVSIYEKRNESILYKNYRASIVWVLQHRMLVLISTIVCFGIALFGLMR
IGTEFLPPTDEGFTSISVNLEKGVAVSETEKIVAKIEDRLKQERDVDVYVSLVGGTQQSQ
ARGQTSANQAELYVKLVPLADRKRSIFEFVEKLEQDLHTELGEQAEITFNVSTSTGSSPN
TLTFRLTDSDEQRLHSAVDKVQQELLKVNAVTNVSTDLDNTVKEIQVEVDRERAKDYGFV
PAQIAQMVNQMTKGQLTTQIIAEDGAVLPVYTGFGHVFNNSIESLKSMQLRSPAGLFVKL
EDIATVAVQEGPVSIRRSDQAAAVAFFVEYETKESLGGISAKVDQALQKAKLPSETQVVF
SGDRELYDSAINDMLLAVALAVVLVYIVMAAQFESFKHPFVIMFTVPLMIIGVAIAMFMT
NTLIGVTSVIGILVLVGIVVNNGIVLVDYINQQKSKGMGTYDAILLATQDRLRPILMTAL
TTILGLLPLALGFGEGTEMNQPMGIAVIGGLVTSTLLTLYIVPTVYSLMDKETRKIR
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgaacattagtgatttttcaattaaaagacccgtttttacaattgttacgatgctattt
gtcattattttaggtggggtttcattattaaaaataccaattacgttaatacctgagcta
catccacctataggtgtcgttgttacttcttatcctggagcgagtccagcagaagtcaat
gaaaagataaccaagcctttagaaacaacgctcgcaaccctaccaggtataaaaaaacta
cagtctacctcacaagaaggatccaatttaattgtacttgagtttaattggtcaaccaat
atagaagatgtacagcttgatattttacagcgaattgatatgacccccttaccgagtgat
gctgaaaagcctagctttttaaagtttgacccatcccaatttccgattatacagctttcg
cttcgtgcagaaaatgatgatgtagacgtacgattattggcggaggacttagaaaaagag
cttcgtcgaacagctggagtcgcaagtgtaaatgtttctggtaagcttgtagaagaagtt
caactaactttagatgaatcaaagctagttgaaaaaggcttaacgcaagcggatataata
caaatcattcaatcgaacaatgtatctcttccaggagagcccgtgttaactaacgatggg
aaaatgctaactacacgtatcctgagcacattaagtacacctgaagacatcgctgattta
attgtttcagttaatccattagatggtaaagccttgacagttggggaggtagcgactgtt
gaacgtgtagaacagatatccatgaccacaacgcgagcaaataaccatccagctgtatta
atgtctgttttacaggagtcaggtgcgaatacagcagaggtatcgaaggcctttcaagat
gcgttaaatgaattattggcaaagaagcagtatcagggcattgttgctgatgtactaaca
gatcaaggaaactatgtagatttagcgattagcaatattggatcctcgttattattaggt
ggcttattcgcaatgttcgtgctttttgtctttttacgtagcgtgaaaagtcctattatt
ataggcattgctattccatactcagtaattgtcacatttgttttaatgtattttgcgaat
ttctccctcaatattatgacattgggagcattagcgcttgggattgggatgcttgtagat
aatgccatcgttgtgattgaaaatattgagcgtcatctaggaattggcaagagccctata
gtagcagctaaagaaggaacgaaagaggtagcacttgctatcaccgcgtccactcttact
acaattgcggtatttattcctgtcatgtttattgagggattaataggacagattttcaca
gaatttgccttaaccatctcctttagtttaattgcttctttagtggttgcattaacggtt
gttccaatgcttgcaagccgtcttttaaaaataaaagctgttagcatttatgagaaacgt
aatgagtcaatcttatataaaaactatagagcttccattgtttgggtattgcaacatcgc
atgcttgtccttatctcaacaatcgtctgctttggcatcgcactgtttggtcttatgcga
atcggtacagagtttttaccaccgaccgatgaaggatttacttcaattagtgtaaatcta
gagaagggtgttgctgtatcagaaacggagaaaatagttgcgaaaattgaagatcggcta
aaacaggagagggatgtggatgtatatgtcagcttagttggtggtacacaacaatcacag
gctcggggacaaacaagtgcaaatcaggcagagctttatgtaaagctagttcctttagca
gatagaaaacgttcaatttttgaatttgttgagaagcttgagcaagatttacatactgag
cttggtgaacaggcagaaatcacctttaatgtctccacatcaactggctcatccccaaat
acattgacatttagattaacagattctgatgaacagcgactccatagtgcagtcgataaa
gtacaacaggagcttttgaaggtaaatgctgtcacaaacgtctccacagatttagataac
actgtaaaagaaattcaagtggaggtggaccgagaaagggcaaaagattacggatttgtt
cctgcacaaatagcacaaatggtcaatcaaatgactaagggtcaacttacaacacaaatc
attgcagaggatggtgcggtactaccggtttatacaggctttggacatgtctttaataat
agtatcgaatctttaaaatctatgcagttacgttctcctgcaggcttatttgtaaagctt
gaggatatagctactgttgctgttcaagaaggacccgtatcgattagacgttctgatcaa
gcggctgctgtagcattttttgtggagtatgaaacgaaggaatctttaggcggtatttcg
gctaaagtcgaccaagcattgcaaaaggctaagttaccttctgaaacccaggtagtcttt
agtggagatcgtgaactttatgatagtgccatcaatgatatgcttttagccgttgcatta
gctgtagtgctcgtatatatcgtaatggcagcacaattcgaatcatttaagcatccattt
gtaatcatgtttacggtaccgttaatgattattggtgttgccatagcaatgtttatgaca
aatacgcttattggggtgacctctgttatcggtatattagtccttgtagggattgtcgtt
aataatggaattgtgcttgtagattatattaatcagcaaaagtctaaaggaatggggacc
tatgatgcgattttacttgctactcaagatagacttcgcccaattttaatgacggcgctc
acgaccattttaggtttgctgccacttgcactgggctttggtgaaggaacagagatgaat
cagcccatgggtattgcagttattggcggccttgtcacatcgactttgctgacattatat
attgtaccgactgtttatagcttaatggataaagaaactcggaagatacggtag
DBGET
integrated database retrieval system
