Lysinibacillus pakistanensis: GDS87_07930
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Entry
GDS87_07930 CDS
T06280
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GDS87_07930 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpak03400
]
GDS87_07930 (nth)
Enzymes [BR:
lpak01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GDS87_07930 (nth)
DNA repair and recombination proteins [BR:
lpak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GDS87_07930 (nth)
Prokaryotic type
GDS87_07930 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
EndIII_4Fe-2S
5-nucleotidase
Motif
Other DBs
NCBI-ProteinID:
QGG50891
UniProt:
A0ABX6D8C0
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All DBs
Position
1712133..1712795
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AA seq
220 aa
AA seq
DB search
MLTKKQWEHCLAEMDRMFPEAHCELVHENPFELTIATLLSAQCTDVLVNKVTKTLFQKYK
KPEDYLAVSLEELQQDIRSIGLYRNKAKNIQALCQRLLDEYEGEIPASREALVTLPGVGR
KTANVVLSVAFDIPALAVDTHVERVSKRLGLCRWKDSVLEVEETIMKKTPMDKWSKTHHQ
LIFFGRYHCKAQNPGCQSCPLLGECREGQKRLKKGLVKEA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgctaacaaaaaaacaatgggagcattgtctagccgaaatggatcgtatgtttcctgag
gcacattgtgagctcgtgcatgagaatccgtttgagctaacgatagccacattgttatct
gcacaatgtactgatgttcttgtcaataaggttacgaaaacgttgttccaaaaatataag
aaacctgaagattatttagcagtatccttagaggaattacagcaggatattcgttccatc
ggcttgtatcgaaataaggcaaagaatattcaagctttatgtcagcgtttgttagatgaa
tatgagggtgagataccagccagtcgagaagctttagtgacattgcctggtgttggtcgt
aaaacggctaatgtcgtattatcggtagcattcgatatccctgcacttgcagtggataca
catgtagagcgggtgtccaagcgattagggctttgccgctggaaggattcggtgcttgag
gtggaagaaacgattatgaagaaaacaccaatggacaagtggtcgaaaacacatcatcag
ctcattttctttggccggtatcattgtaaggctcaaaatccaggctgtcagtcttgcccg
ttactcggagaatgtcgagaaggacaaaagcgtttgaaaaaaggactggtgaaagaggcg
tga
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