Lysinibacillus pakistanensis: GDS87_12050
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Entry
GDS87_12050 CDS
T06280
Symbol
vanR
Name
(GenBank) VanR-ABDEGLN family DNA-binding response regulator
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak01502
Vancomycin resistance
lpak02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GDS87_12050 (vanR)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GDS87_12050 (vanR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lpak02022
]
GDS87_12050 (vanR)
01504 Antimicrobial resistance genes [BR:
lpak01504
]
GDS87_12050 (vanR)
Two-component system [BR:
lpak02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
GDS87_12050 (vanR)
Antimicrobial resistance genes [BR:
lpak01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
GDS87_12050 (vanR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
PDE8A_N
GerE
Motif
Other DBs
NCBI-ProteinID:
QGG53920
LinkDB
All DBs
Position
2503178..2503873
Genome browser
AA seq
231 aa
AA seq
DB search
MTINILVVDDEKEIADLIELYLKNEGFNVFTFYDAKEALTCIQTKKLDLAILDVMMPDID
GFEICRRIREYYHFPVIMLTAKDEEIDKITGLTLGADDYITKPFRPLELIARVKAQIRRF
TRYNQQEASQNDMIIDFSGLILDQNTRKCMLHEKQLSLTPTEFSILWFLCINRGRIVSSE
ELFQKVWGEKYFSSNNTVMVHIRHLREKMNDSAENPKFIKTVWGVGYTIEK
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
ataacaattaatattcttgtcgtagatgacgaaaaggaaattgccgacttaatagagctt
tatttaaaaaatgaaggctttaatgtctttacattttatgatgccaaggaggcactaact
tgtattcagacaaaaaaattagatttagctattctagatgtgatgatgcctgacatagat
ggctttgaaatttgcagaagaattagagaatattatcattttccagtgattatgctaaca
gccaaggatgaggaaattgataaaataacaggtctaactttaggggctgatgattatatt
acgaagccatttcgaccattggagctaatagctcgagtgaaggctcaaatcaggagattt
acaaggtacaatcagcaggaagcttcgcagaatgatatgattattgatttttctggactt
atattagatcaaaacacacggaaatgtatgttgcatgaaaaacaattgtcacttacacct
acagaattttcaatcctgtggtttttatgtatcaataggggacgtatcgtttcttccgag
gaactatttcaaaaagtctggggagaaaaatattttagcagtaataatacagtaatggtc
catatcagacatttacgagaaaaaatgaatgattctgcagaaaacccaaaatttataaaa
actgtttggggagtggggtacaccattgaaaaatga
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