Lysinibacillus pakistanensis: GDS87_21475
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Entry
GDS87_21475 CDS
T06280
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak00270
Cysteine and methionine metabolism
lpak00450
Selenocompound metabolism
lpak00670
One carbon pool by folate
lpak01100
Metabolic pathways
lpak01110
Biosynthesis of secondary metabolites
lpak01230
Biosynthesis of amino acids
lpak04980
Cobalamin transport and metabolism
lpak04981
Folate transport and metabolism
Module
lpak_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
GDS87_21475 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
GDS87_21475 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GDS87_21475 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GDS87_21475 (metH)
04980 Cobalamin transport and metabolism
GDS87_21475 (metH)
Enzymes [BR:
lpak01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
GDS87_21475 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S-methyl_trans
Met_synt_B12
Pterin_bind
B12-binding_2
B12-binding
CdhD
Motif
Other DBs
NCBI-ProteinID:
QGG53297
LinkDB
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Position
complement(4469353..4472784)
Genome browser
AA seq
1143 aa
AA seq
DB search
MAKHLIEEQLEKRILILDGAMGTMLQNENLSAEDFGGEEYDGCNENLVLTRPDVLEKVHR
KYLEAGADIISTNTFGGTPLVLNEYDLGAKAEEINKRAVEIARKAVDDFTTSDWPRFVAG
AMGPTTKTLSVTGGITFDELEENFYVQAKALIEAGADVLLLETSQDMLNVKAGTLGVSRA
FEVTGKVLPVMISGTIEPMGTTLAGQSIDAFYISIEHIKPLSVGLNCATGPEFMTDHIRS
LAELSTGYISCYPNAGLPDEEGCYHESPESLSQKLKGFAEKGWLNIVGGCCGTTPAHIAA
IREVLKDEKPRQLPEKTHGHVVSGIEPLVYDDSMRPLFIGERTNVIGSRKFKNLIIDGKF
EEAAEIARAQVRNGAHVIDICLANPDRDELADMRGFMQEVVKKVKVPLVIDSTDEKVIEE
ALKFSQGKAIINSINLEDGEERFDAVMPLVKKYGASLVVGTIDEQGMAVDRHRKLEIAER
SYYLLTEKWGLAPEDIIFDPLMFPVGTGDEQYIGSALETIEGIRLIKEKMPRTLTVLGVS
NISFGLPPVGREVLNAVYLYHCTQAGLDYAIVNTEKLERYASIPEEEIKLANNLLFNTND
ETLAIFTDFYRDKKKEKTEADIPKTVEGRLAYYILEGTKEGLIEDLEAAREIFEAPLDII
NGPLMDGMAEVGRLFNNNQLIVAEVLQSAGVMKAAVAHLEQFMEKNEESAGKGKMVLATV
KGDVHDIGKNLVDIILSNNGYKVVDLGIKVTPAQLIEAVRKEKPDFIGLSGLLVKSAQQM
VITAQDFKEAGIDVPILVGGAALSRRFTETKIADEYDGPVIYSKDAMQGLEQANLLMGSE
TRADFLAKIDESRKKRLEADEKRAARPAKETAIKPARTVKEAPVFLPADVRRHVKKEYSV
SHLYPYVNMRTLLGHHLGLKGQVQQLLDAGETRAIELKDLVDDYLKSDLLKPSGMYQFFP
AQADGDDVIVYDPADNKTEIERFTFPRQQVEPFLCLADFLKTVESGEMDYIALMVVTAGQ
GVMAKARELKEDGKFLESHALQSTALELAEGFAERMHQEIRDQWGFPDATDFTMRDRFAA
KYQGQRFSFGYPACPNLEDQEKLFGLLKPEDIGVHLTEGFMMEPEASVSAIVFAHPDARY
FNV
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcatttgattgaagagcaacttgagaaacgaattttaattcttgatggcgca
atgggaacaatgctacaaaacgaaaacttatcagctgaagatttcggtggcgaggaatat
gatggctgtaatgaaaatcttgtactaactagacctgatgtgcttgaaaaggttcataga
aaatatttggaagcaggggcagatattatttccacaaatacatttggaggtactccactt
gtattaaatgaatatgatctgggagcaaaagcagaggaaatcaataaacgtgctgtagaa
atagcacgtaaggcagtggatgattttactacctctgattggccacgttttgtagcagga
gcgatgggacctactacaaagaccttatcagtgacaggtggaattacctttgatgagcta
gaagaaaacttttatgtacaggcaaaggcattaattgaagctggagcggatgtattgttg
cttgaaaccagccaggatatgctcaatgtgaaggcgggcactttaggagtatctcgcgca
tttgaagtgactggcaaagtgcttcctgtgatgatatcgggaacaattgaaccaatggga
acgacacttgcaggacaatccatagatgcattctacatttctatcgagcatattaaacca
ctatctgtaggtctgaactgtgcgacagggccagaatttatgacggaccatattcgttca
ttagcagagctttctacgggatatataagctgttacccgaatgcaggcttacctgacgag
gaaggatgctaccatgaatcaccagagtcactgtcgcaaaagctaaaaggctttgcagaa
aagggctggctgaatatagtgggaggctgctgtggaacaacaccggcccatatcgctgct
attcgtgaggtactaaaggacgaaaagccacgccaattacctgagaaaactcatggtcat
gtagtgtcgggtatcgagccattagtgtacgacgattctatgcgtccattatttattgga
gaacgtacaaatgtaattggctctcgtaagtttaaaaacctaattattgatgggaaattt
gaggaagcagcagaaattgctcgtgcacaagtaaggaatggtgcccatgttattgatatt
tgtttagcaaatcctgatcgtgatgaactagcagatatgcgaggctttatgcaggaggtt
gtgaaaaaagtgaaagtacctcttgtaatagactcaacggatgaaaaagttatcgaagaa
gcactcaaattttcccaagggaaagctataatcaactctattaatttagaggatggggaa
gagcgttttgatgctgtgatgccgcttgtgaaaaaatatggtgcctctttggttgttgga
acgatagatgaacaagggatggcagttgatcgacatcgtaagctagagattgctgaacgt
tcttattacttgttaacagaaaaatggggacttgcaccagaagatatcatctttgatcca
ttaatgtttccggtaggtacaggagatgagcaatatattggttctgctttagaaacaatc
gaaggaatccgactcatcaaagaaaaaatgccacgtacattaacagtgcttggtgtcagc
aatatctcatttggattaccgcctgttggccgtgaggtgttaaatgcagtttatttatat
cattgtacacaggcaggcttagactatgcgattgtgaatactgaaaagctagagcgctac
gcttccattccagaagaggaaattaagcttgcaaataatttattatttaatacgaatgat
gagacattagccatattcacagatttttatcgtgataaaaagaaggaaaaaacagaggct
gacatcccaaaaacagtggaaggtcgtttagcttactatattttagaggggacaaaagaa
ggtcttattgaggatctagaagctgctcgggaaatatttgaagcacctcttgatattatt
aacggaccattgatggatggaatggctgaggtcggtcgattatttaataataatcagctt
attgttgcggaagtattacaatccgctggggttatgaaggctgctgttgctcacttggag
caatttatggagaaaaatgaagagagtgctggtaaaggaaagatggtgctagcaacagtc
aaaggggatgtccatgatatcgggaaaaacctagttgatattattttaagcaataatggc
tataaggtggttgaccttggcatcaaagtaactcctgctcaattaattgaagcggttcga
aaagaaaagccggactttatcgggctttcaggcttacttgtaaaatcagcacagcaaatg
gtcatcacggcacaggatttcaaagaagcggggattgacgtcccaattttagtgggcggt
gcagcattatctcgacgttttacagaaactaagattgcggatgagtatgatggaccagtc
atctattcgaaggatgcgatgcaaggattagagcaggcaaatcttttaatgggttcagaa
acacgtgcagatttcctagccaaaattgatgaatcccgtaaaaaacgtttagaagcagat
gagaaacgagctgcccgccctgcaaaagaaacagctataaaacctgctcgcacagtaaag
gaagcacctgtatttttaccagccgatgtaaggcgacatgtgaaaaaggaatattctgta
tctcatttatatccttatgtaaacatgcgcactttactaggtcaccacttgggtttgaag
gggcaagtacaacaattacttgatgcgggagaaacaagagcaatagaattaaaggactta
gtggacgattatttaaaaagtgatttgttgaaaccgtctggaatgtatcagtttttccct
gcacaggcagatggagatgatgtaatcgtctatgatccagcagataataaaacagaaatt
gagcgttttaccttcccacgtcagcaagtggaaccatttttatgccttgcagatttctta
aaaacggttgagagtggggaaatggactatattgccctaatggttgttacagcaggacag
ggggtcatggcaaaggcgcgtgagttaaaggaggatgggaaattccttgaaagccatgca
ttacaatctacagcactagaattagcagagggctttgcagaaagaatgcatcaggaaatt
cgtgatcaatggggcttcccagatgccacagactttacaatgcgtgatcgttttgcagct
aaatatcaaggacagcgcttctcattcggctatcctgcgtgtccaaatttagaggatcag
gagaagttgtttggcttattaaaaccagaggatattggtgttcatttaactgaaggcttt
atgatggaaccagaggcttctgtttctgcaattgtctttgcacatccagatgctcgctat
tttaatgtgtaa
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