Leishmania panamensis: LPMP_250760
Help
Entry
LPMP_250760 CDS
T06539
Name
(RefSeq) DNA repair protein, putative
KO
K15083
DNA repair protein RAD16
Organism
lpan
Leishmania panamensis
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpan03400
]
LPMP_250760
DNA repair and recombination proteins [BR:
lpan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
LPMP_250760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-PARP
zf-RING_2
zf-RING_11
ResIII
ERCC3_RAD25_C
zf-C3HC4_2
zf-C3HC4
PHD
zf-rbx1
zf-ANAPC11
zf_RING_Vps8_fungal
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
22575724
NCBI-ProteinID:
XP_010699646
UniProt:
A0A088RUI7
LinkDB
All DBs
Position
25:261036..264332
Genome browser
AA seq
1098 aa
AA seq
DB search
MMSNFAQHPDLTLNERLVWRPAKGKDQVYNYILQKAPTARARCRKCSQLISKGEMRVGVP
IRHNAGDNGWISAWQHLGCTRMEKSESENYESTMHGFTELKPEEQVHVVNEINSMEMPDH
LKPLDPNDLMHRGKMEQMSPPSALLRHLLPYQKEGMGWMVRQETESPVKGGILADEMGMG
KTIQAIGMMLTHRINGPTLIVCPVSSMLQWEAEIKEHVVPGALSVVIVYRTTKVTKEELE
NADVVLTTYPMLEQAWRALINEIKVPCPYCELLFIPRQLVVHNKYFCGPRARKTLKQAKR
EKHTAPAAVSNSRGLQSNETIRKGLRTLHVDLGEEEVAEEEVNAFNATTAQPQRKRCRKD
AANGTVDPAGEVNGGSISAAKKEKQEESGSKVVDGCQSSPEKATFKCSIKVEDATDEVTA
LAKKGTVAQPAAASRGVVGPIGMYQELMREAGRTVRSRWDAARKDGESSEDENMAESSEG
NDSDASDLSYDSAAAAAEEAAAEEQASKALEAFRCTACHFQLLRYPFCPKNGQHHVIRED
LRDIIEKDTGGDDVDLDASIFHSIKWARIILDEAHRIKGRTTSTARSAFALVAEYRWCLT
GTPLQNRVGDLYSLLRFLRMRPYAHYYCEREGCSCASLSHPFSSTSLHQCVFCGHGPLQH
HSYFNRYILNPINRYGYIGDGRRGMMMLSNDVFSRAMLRRTKVERAADLQLPSLTVEVLH
IQLTREERNFYESLYKKSTAEFDTFVHKGTVLHNYAHIFQLLSRLRQALDNPLLVMHGMN
VGTVVNVKGVCGICGDGIEGESALKVHPCRHQFHRLCLGQFLESAPDNEFHCSICFVRIN
VDLRQLRQDAEEDDDEGIGGFAAALPPELEDEVNTEENDDAEGNEDGSLSQVSQYMQNKG
RRRTTHTAPTKKEQRSILTRLDPQKPLHGTKLDAIADYIERVPKDEKVVVFSQFGSMLDL
MQYWLQRRFIKAVKLCGSLTLTQRQSVLQAFLHDRSVRVILISLKAGGEGLNLQVANHVV
LTDPWWNPAVEMQAVQRAHRIGQTRPVHAVRFVTEHSVEERMVDLQEKKMLVFEGTIDGK
LQSLNKLTEEDLQFLFTR
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgaacttcgcacaacatcctgatcttacgctaaacgagcggttggtctggcgg
ccagcgaagggcaaggaccaggtctataactacatcctgcaaaaggctccgacggccagg
gcacgatgtcggaagtgctcacagctgatctcaaagggagagatgcgagttggtgtaccc
attcgccacaacgcaggcgataacgggtggatctctgcgtggcaacaccttgggtgcacc
cgcatggagaagagtgagtcggagaactacgaaagcaccatgcacgggtttacagaattg
aagccagaggagcaagtgcatgtggtcaatgagatcaactctatggaaatgccagatcac
cttaagccgttggatccaaatgatttgatgcaccgaggtaagatggagcaaatgtcaccg
ccgtccgcactgctgcggcacctgttgccttatcagaaggagggaatggggtggatggtg
cgccaggagactgagtctcccgtcaagggcggcatccttgcggacgaaatgggtatggga
aaaactatccaggccatcggaatgatgctcacgcaccgcatcaacggccccacgcttatt
gtctgtccggtaagctccatgttgcaatgggaggctgaaattaaggagcacgtggtccct
ggagctctctcggttgtcatcgtgtaccgcaccaccaaggtgacgaaggaggagctggaa
aacgcggatgttgttcttaccacttatccaatgctcgagcaggcctggcgcgctctcatc
aacgagatcaaggtaccatgtccctattgtgagctgctctttattcctcgccagttggtg
gtgcacaacaagtacttttgtggtccgcgcgccaggaagacattgaaacaggcgaaacgt
gaaaagcacaccgcgcctgcagcagtgagtaactcaaggggtctgcagtctaacgagacc
attcgaaaggggttgcgaacactccacgtagatctcggtgaagaagaggtagccgaggag
gaggtcaatgcgttcaatgctacaacggcacagccgcagcggaagcggtgtcgcaaggac
gcagctaacggcacggttgatccggctggggaggtcaacggcggtagcatctccgcggct
aaaaaagagaagcaagaggagtcggggagtaaggtggttgatggttgccaatcatcaccc
gaaaaggcaactttcaagtgttccatcaaggtggaagatgccactgatgaggtgacagcg
ctggcaaaaaaaggcactgtggcccagccagctgcggcttcacggggagttgttgggccg
atcggcatgtaccaagagcttatgcgagaagctggccgcaccgtgcgcagtcgctgggac
gcggcgaggaaggatggcgagagcagcgaagacgaaaacatggctgagtccagtgagggc
aatgacagcgatgcgtcggatttgtcctacgactctgcggctgcggcggccgaggaagct
gcggcggaagagcaagcttctaaagccctggaggcgttccgctgcaccgcctgccacttt
cagctgctgcggtaccctttctgccccaagaatggccagcaccacgttatcagggaggat
ctgcgtgacatcatcgaaaaggataccggcggcgatgatgtcgaccttgatgcttcaatc
ttccactccatcaagtgggcgcgcattatcctggacgaggcgcaccgcatcaaaggccga
acaacgagcacggcccgctctgccttcgctttggtggccgagtaccggtggtgtctcacc
ggcaccccactacagaaccgtgttggtgacttgtacagtctcctgcgctttttgcgcatg
cgaccgtacgcacactactattgcgaaagggagggctgctcgtgtgcctcgctctcgcac
ccgttctcctccacctcgcttcaccagtgcgtcttctgcggccatggaccactgcagcac
cactcctatttcaaccgctatattctcaatccgatcaaccgctacggctacattggagac
gggcgacgcggtatgatgatgctgtcgaacgacgtcttttcccgggcgatgttgcgccgc
accaaggtcgagcgggccgctgacctgcagctgccatcgctgacggtcgaggtgcttcac
atccagctcacgagggaggagcgtaatttttatgaatccctgtacaagaagagcacggcc
gagttcgacacgttcgtgcacaagggaacggtgctgcacaactatgcacacattttccag
ctgcttagtcgcttgcgtcaggccctcgacaacccactgcttgtgatgcacggcatgaat
gttggcacagtggtgaacgtcaagggtgtttgcggcatctgtggcgacggcatcgaaggt
gagagtgctctgaaggtacacccgtgccggcaccagtttcaccgactgtgtctcggccag
ttcctggagagtgccccagacaatgagttccactgctccatctgctttgtgcgaatcaac
gtggatctgcggcagctgcggcaggatgcggaggaggacgatgacgagggcatcggcggc
tttgcggcagcgttgcctcccgagctggaagatgaggttaacaccgaggagaacgacgac
gctgagggtaatgaagacggcagtctatctcaggtgtcgcagtacatgcaaaataaggga
aggcggcgcacaacgcacaccgcgccgaccaaaaaggaacagcgcagcattctcacccgg
ctggacccgcagaagccgctgcacggcacaaagctcgacgccatcgccgactacatcgag
agggtgccgaaagacgaaaaggtggttgtcttttcgcagtttggtagtatgctggacttg
atgcaatactggctgcagcgccgcttcatcaaagctgtaaagctgtgcgggtcactgacg
ctgacgcagcggcagtcagtgctgcaggcctttctccatgaccgaagcgtacgtgtcatc
ctcatctctctgaaggcaggcggagagggtttgaacctgcaggtagccaatcacgtggtg
ctgaccgatccgtggtggaacccagcggtcgagatgcaggccgtgcagcgagcgcaccgg
atcgggcagacccgcccggtccacgctgtccgcttcgttacggagcattcagtagaggag
cgcatggtcgacctgcaagaaaagaagatgctcgtgttcgagggtaccattgacggcaag
ttgcagtcgctcaacaagctcaccgaggaagatctgcagttcctctttacacggtag
DBGET
integrated database retrieval system
