Lentilactobacillus parabuchneri: FAM21731_00184
Help
Entry
FAM21731_00184 CDS
T04617
Name
(GenBank) Ribonuclease J 1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lpar
Lentilactobacillus parabuchneri
Pathway
lpar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAM21731_00184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpar03019
]
FAM21731_00184
Messenger RNA biogenesis [BR:
lpar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FAM21731_00184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF4453
DUF4126
Motif
Other DBs
NCBI-ProteinID:
APR06432
UniProt:
A0A1X1FHJ9
LinkDB
All DBs
Position
161284..162972
Genome browser
AA seq
562 aa
AA seq
DB search
MKKLNVKNNEAAIYGVGGLGEIGKNTYGIQFQDEIILIDAGIKFPEDDLLGVDYVIPDYQ
YLVENKDKIKALVITHGHEDHIGGVPYLMKVLNVPIYAGPLAMALIKNKLEEHGLLNSVE
LHEVSDKSVLKFRKMKVSFFRTTHSIPDTVGVAVHTPVGVIVETGDYKFDLTPVTNQPPD
LQEMAKLGAEGVLCLMSDSTNAERPIWTKSEKWVGNSIAHIFDNIKDRIIFATFASNISR
IKTACDNAMAHGRKIAVFGRSMDAAIVNGRELGYLDIPDDAFVDAHELQSLPANKTLILC
TGSQGEPMAALSRIANGTHRQISIQPGDTVIFSSNPIPGNTTSVNSVINKLEEAGANVIH
GRVNNIHTSGHGGQEEQKLMLRLMKPKFFMPIHGEYRMLKIHTELAEQCGVPLDHSFIMQ
NGDVLALSKDTARMAGHFTAGDVYIDGSGIGDVGNLVLRDRQLLSEEGIVVVVATINLDH
QEIQSGPDILSRGFVYMRESGELLDEGRRRVFKTIRKSMRAKKATESSIRNAVIDDLQEF
LYTKTERHPMILPMLIMNGGQK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactaaacgtcaaaaataacgaagcagctatctatggcgttggtggtctgggc
gaaatcggtaaaaacacttatgggatccaatttcaagacgaaattatcctgatcgatgca
ggaattaagtttcctgaagatgatcttttaggtgtcgattacgtcattccggactatcag
tatctagtggaaaacaaggacaaaatcaaagcattggtgatcacccacggtcatgaagac
cacattggcggtgtcccatatttgatgaaagttttaaatgtcccgatttacgctggaccg
cttgcgatggcgcttattaagaataaattagaagaacacggcttactgaattctgtcgag
ttacacgaagtcagtgacaagtctgtgctgaagttccgaaaaatgaaggtttcgtttttc
agaaccacccactcaatcccagacaccgtcggggttgccgttcatacgccggtgggtgtc
atcgtcgaaactggtgattataaattcgacctcacaccagtgaccaaccagccgcctgat
ctccaagaaatggccaaattaggtgctgaaggtgtcctctgtctcatgtccgatagtaca
aacgctgaacgaccaatttggaccaagtctgaaaagtgggtcggcaattctatcgcccat
attttcgataacattaaagacagaatcatctttgcaacctttgcctcgaacatttcacgg
attaaaactgcttgtgacaatgcgatggctcatggccgaaaaattgccgtatttggtcgc
agtatggatgctgcaatcgtcaatggccgcgaactggggtacttggatattccagacgat
gcctttgtcgatgcgcatgaactacagtcactgcctgccaataagacactgattctttgt
accggatctcaaggtgaaccaatggccgccctttcacggattgccaacggaacccaccgc
cagatttcgattcaaccaggcgacacggttattttttcaagtaacccaattcctggaaac
acaacgagtgtcaatagtgtcatcaacaagcttgaagaagccggcgcaaatgtgattcat
ggccgggtcaacaacattcacacttccggtcacggaggccaggaagaacaaaagctgatg
cttcgcttaatgaagcctaagttcttcatgccaattcatggtgagtatcgaatgctcaag
attcataccgaattagctgagcagtgcggggttccgctggatcacagctttatcatgcaa
aacggtgatgtacttgccctttcaaaagatacggccagaatggctggtcacttcactgct
ggtgatgtttatatcgatggcagtggaattggtgatgtgggcaaccttgttctaagagat
cgtcaacttctttcagaagaaggaattgtagtcgttgtcgccaccatcaacttggaccac
caggaaattcagtctggtccggatatcctttcacgaggatttgtttacatgagagagtcc
ggcgagcttttggacgaaggccgcagaagagtctttaagaccatccgcaagtcaatgaga
gcaaagaaggcaactgagtcttctattagaaatgctgtgattgacgacttgcaggaattc
ttgtacaccaagactgaacgccatccgatgatcttaccaatgttaatcatgaatggtggt
caaaagtag
DBGET
integrated database retrieval system
