Lentilactobacillus parabuchneri: FAM21731_01520
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Entry
FAM21731_01520 CDS
T04617
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lpar
Lentilactobacillus parabuchneri
Pathway
lpar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAM21731_01520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpar03019
]
FAM21731_01520
03400 DNA repair and recombination proteins [BR:
lpar03400
]
FAM21731_01520
Enzymes [BR:
lpar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FAM21731_01520
Messenger RNA biogenesis [BR:
lpar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FAM21731_01520
DNA repair and recombination proteins [BR:
lpar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FAM21731_01520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
APR07694
UniProt:
A0A1X1FE86
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All DBs
Position
1586311..1588089
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AA seq
592 aa
AA seq
DB search
MTPQELLKTKFGYDSFRPGQQTVIDDILAHKNVLTIMPTGGGKSLCYQIPAMLEDGLTLV
VSPLIALMKDQVDALNESGIPATFINSSLDFSEIDDRFAQAQNGDVKLLYVSPERLDSGA
FNQLARLPIDLVAVDEAHCISQWGHDFRPSYLALTERLHELPTKPTIVALTATATPQVAD
DIKQRLHISEEVKTGFERDNLAFKVVRNQDSDKYLLDYLKLNAGESGIIYASTRKEVERV
SKMLKKHKFSVTMYHGGMSKDQRRKNQDDFLYDRALVMVATNAFGMGIDKSNVRFVIHDS
VPGSLEEYYQEAGRAGRDGLPSEAILLFKLRDVQTQHFFIDQSERDEQSKQRAYQKLQMM
TQYANTQQCLQQFILDYFGEKEGKTCGRCSNCLDTRDSQDITVDTQKVLSCVLRMKERYG
KSLVSQVLTGSKIQKIRDFHFDQLSTYGIMKGESQKEVMGLIDYLTAAGYLTASGGQYPV
LKVTSLGGAVLQGSERVSRKVSDKATKTLAEDDELFEQLRQLRRELAEKQGVPPFVIFSD
KTLHEMSAVMPANESQMLDVKGVGESKLAKYGDQFLDVILNYQSEAKTGVQA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgacgccccaagaactactgaaaactaaatttggttatgacagctttcgtccgggccag
cagaccgtcattgacgacattttggcgcacaaaaacgtgttgaccatcatgccgaccggt
ggcgggaaatcgttgtgttaccagatccctgccatgcttgaagatggcttaacactcgtc
gtttccccgctgattgccttgatgaaagaccaggtggacgcgttaaatgagtccggaatt
ccagcgacgttcattaacagcagcttagacttcagtgaaattgatgaccgatttgcccaa
gcgcaaaacggtgacgtgaagctgctttacgtatcaccggagcggttggactcgggggcc
ttcaatcaattggcacgactgcccattgacttggttgccgtcgacgaagcgcactgtatt
tcacagtggggtcatgattttcgcccaagctatttggcattaaccgaacggctgcatgaa
ctgccgaccaagccgacaattgttgctttgacggcgacggcaactccacaagtggctgat
gacatcaaacagcgcctgcatatctcagaagaggttaagacgggctttgaacgggataat
ttagctttcaaggtggttcgaaatcaggatagtgataagtatctactggactatttaaag
ttaaatgccggtgagtccggtatcatctatgccagcacccgcaaggaagttgagcgggtc
tccaagatgctcaaaaaacacaagttttcagtgactatgtatcatggtggtatgagcaag
gatcagcggcggaagaatcaagatgactttctgtacgaccgtgcactggtgatggttgcg
accaacgcctttggaatggggatcgataagagtaacgtgcgctttgtgattcacgactcc
gttcctggaagcttggaggaatactaccaggaagccggcagagcgggacgagatggcctg
cccagtgaggcaattttgctgttcaaattaagggatgttcaaacccagcatttcttcatt
gatcaatctgaacgagacgagcaaagtaagcagcgcgcttaccaaaagctgcaaatgatg
acgcagtacgccaatacccagcagtgcctgcaacaatttatacttgattactttggtgaa
aaagaggggaaaacgtgcggtcgttgtagtaattgccttgatacccgtgactctcaggat
attactgttgacacccaaaaggtcctgtcgtgtgttttacggatgaaggaacgctatggc
aagagtctcgtttcccaagtgttgacgggctctaaaatccagaaaatccgtgattttcac
tttgatcaactatcaacttatggcatcatgaagggcgaatcccagaaagaggtcatgggg
ttgattgattacttgaccgcggcgggttatctgactgccagtggcggccagtacccagtg
ctgaaagtcacttccttgggtggcgcagtgctgcagggatcggaacgtgtgtctcgaaag
gtctcggataaggcgaccaagacgttggctgaagacgatgagttgtttgagcaactgcgg
caattgcgtcgtgaattggctgagaagcagggcgtgccgccgtttgtgattttctctgac
aagacgcttcacgaaatgagcgccgtcatgcctgccaatgagtctcagatgcttgatgtt
aaaggcgtcggcgaaagcaagttggcgaagtatggcgaccagttcctggacgttatttta
aattatcaatcagaagccaagactggggttcaagcgtaa
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