Lentilactobacillus parabuchneri: FAM21731_01749
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Entry
FAM21731_01749 CDS
T04617
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lpar
Lentilactobacillus parabuchneri
Brite
KEGG Orthology (KO) [BR:
lpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpar03009
]
FAM21731_01749
Enzymes [BR:
lpar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FAM21731_01749
Ribosome biogenesis [BR:
lpar03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FAM21731_01749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_25
MTS
PrmA
Cons_hypoth95
Methyltransf_11
RrnaAD
N6_N4_Mtase
DOT1
Methyltransf_4
Ubie_methyltran
TRM
Methyltransf_32
UPF0020
PCMT
Methyltransf_23
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
APR07912
UniProt:
A0A1X1FDQ7
LinkDB
All DBs
Position
1819527..1820900
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AA seq
457 aa
AA seq
DB search
MKKQVPVLKNQNYDVDISDLTYQGMGVAKIDDFPIFIENALPTENVTMKVIKVKKNFAFG
KVVRINKKSADRVELVDKAYTQTGIAPLQHLKYDAQLKFKQHLIEVDFDKLKLDVEVNPT
IGMDDPTHYRNKAQIPVRMVNGQLQTGFYRKHSHDLVPIEDFYIQDPEIDKAVVVVRDLL
RKFRVQPYDEEHNKGVIRNIMVRRGHYSHEMMIVLITRTEKLPSSGEIVAEITKMLPEVK
SIVQNVNPQRTNALMGKENKVLAGQSTIEDTLLGLKFDISASSFYQVNPVQTEKLYELAT
KKADLSADDTVIDAYCGIGTISLSMAKVAKMVYGVEILPEAVEDAKKNAKINGLTNVMFV
SGKAEDQMAKWQEDGLKPDVITVDPPRKGLEGSLIESVVKMQPKRVVYVSCNPATLARDV
KLFTEQGYHVNQPIQPVDQFPQTVHVESVTVLERQPS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaagtaccagtgttgaaaaatcaaaattatgacgtcgatattagtgacctg
acctatcagggaatgggtgttgctaagatcgatgatttccccatttttatcgaaaacgcg
ttaccaactgaaaatgtcacaatgaaagtgatcaaagttaagaagaactttgcctttggt
aaggtcgttcgcatcaataagaagagcgctgaccgcgttgaacttgtggataaggcctat
acgcaaactgggattgcgccgctgcagcatttgaagtatgatgcccagcttaaatttaag
caacatctaatcgaagtcgattttgacaagctcaaattagacgtcgaagttaacccgaca
atcggcatggatgatcctacccattatcgaaacaaggcccagattccggttagaatggtc
aatggccaattgcaaaccggcttttatcgcaaacattcccacgaccttgtgccaattgag
gacttctatattcaggatcctgaaattgacaaggctgttgtcgttgtccgcgatctgttg
agaaaatttcgggttcagccctacgatgaggaacacaataagggcgttattcgaaacatc
atggtgcgaagagggcattattcccacgagatgatgatcgtcttgattacccggactgaa
aaactcccaagtagtggcgaaattgttgccgaaatcaccaaaatgttaccagaggttaag
agtattgttcaaaatgtgaacccacaaaggaccaatgccttgatgggtaaagaaaataag
gttttggcagggcaaagcacgattgaagatactttgctgggattgaaattcgacatctct
gccagctcgttttatcaggtgaaccctgttcaaactgagaagctttatgaattggccacc
aagaaggccgatttgtcggctgacgatactgtgatcgatgcgtactgtgggattgggacg
atttcactttccatggccaaagttgccaagatggtctacggggtggaaatcttgccggaa
gcggttgaagatgccaaaaagaatgccaagattaacgggctgacgaacgtgatgtttgtc
agcggcaaggccgaggatcagatggctaaatggcaggaagatgggcttaaacccgacgtc
attacggttgacccgcctcgcaaaggactggaaggcagtttaattgagagtgtcgttaag
atgcagcctaagcgagtggtctacgtctcgtgtaatccagccacgttggcccgtgatgtc
aaattatttactgagcaaggctatcatgttaaccaaccaattcaacctgttgatcaattt
ccacaaacggttcacgttgaatcagtaactgttttggaacgtcaaccttcataa
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