Lentilactobacillus parabuchneri: FAM21731_02485
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Entry
FAM21731_02485 CDS
T04617
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lpar
Lentilactobacillus parabuchneri
Pathway
lpar03030
DNA replication
lpar03430
Mismatch repair
lpar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAM21731_02485
03430 Mismatch repair
FAM21731_02485
03440 Homologous recombination
FAM21731_02485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpar03032
]
FAM21731_02485
03400 DNA repair and recombination proteins [BR:
lpar03400
]
FAM21731_02485
Enzymes [BR:
lpar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAM21731_02485
DNA replication proteins [BR:
lpar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAM21731_02485
DNA repair and recombination proteins [BR:
lpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAM21731_02485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
tRNA_anti-codon
HHH_6
DNA_pol_A_exo1
HHH_3
DEDDh_C
RNase_H_2
YhfH
Zn-ribbon_8
T2SSK
DUF1980_C
Motif
Other DBs
NCBI-ProteinID:
APR08609
UniProt:
A0A1X1FC02
LinkDB
All DBs
Position
complement(2513788..2518110)
Genome browser
AA seq
1440 aa
AA seq
DB search
MSLDRKELFEKLLEQLQWPQASELPYFQGAKIDRLEVHKQSQRWQFDISIPKILPFEVFN
DFNARLHSAFQDIATVSLDISVENDTFTEQLLRQYWQWAVPNSGVTSPLLKELCADKYPS
IVDSRVEFVAENDIVKDFMTNTALGPIEEMYQRAGFPDFTIHTIVDESSSQQNIQALKKK
NEAANAELVKKANEAIQENAKAHPKRSGGNGGKTTIGRKIKDDLPITKMEDIVEEERSVV
VSGFVFNKEIRSLRSGRQLLMLKITDYTSSIQVKKFSNKGEEALFEDVNEGNWVKVRGSV
QEDNYSHELTLNAYDINPVKTVSRKDQAPEGEKRVELHLHTTMSQMDATNNIADFAKQAA
NFGQKALAITDHAGVQGFPDAFHAGQKNKIKMLYGVEVNLVDDGVPITYNDKHVPLKDAT
YVVFDTETTGLSAIYDRVIELSAVKMQNSNVIDQFEEFIDPGFHLSERTTNLTSITDEMV
HGSKSEEEVFKLFREFCGDAIVVGHNVTFDMGFMNTGYVRHGMPEMANPIIDTLTLARFL
YPNLRGYRLNTLAKKFDVSLEHHHRAIYDAETTGHLNYLFLKDAEDRYGIAYHDQLNDHM
TDNDAYRHARPSHAILLAKTQAGLKNMFKIVSLSNVEYFYRVPRVPRTQLEKYRDGIIVG
SACSSGEVFTSMMQKGIDEARQKAAFYDYLEVQPKRAYAPLIESGLISDENNLEQILTNM
VKLGEELKKPVVATGDVHYLNPQDYIYRKILINSQGGANPLNRQELPDLHFLTTDEMLGD
FAFLGAEKAKEIVVTNTNKIADEIDDVHPLKDKLYTPKMEGAEDEIKFRTMDTAHKWYGD
PLPKIVADRLDKELKSIIGNGFSVIYLIAQRLVAKSNKDGYLVGSRGSVGSSLVATLTGI
TEVNPLQPHYRCPNCQHTEFFTKGEYSSGYDLPHKNCPECGTKMIGDGHNIPFETFLGFT
GNKVPDIDLNFSGDYQPIAHNYTKVLFGEKNVFRAGTIGTVADKTAYGYVKAFERDTGQV
YRQAEEDRLAKGATGVKRTTGQHPAGIIVVPDYMDIYDFTPIQYPADDQDAAWKTTHFDF
HSIHDNILKIDILGHDDPTMIRMLQDLSGIDPKTIPMDDPGVMSIFSSPEILGVKEDQIQ
SKTGTLGVPEFGTRFVRGMLEQTHPSNYSELLQISGLSHGTDVWIGNADELIKNGTATIA
NVIGCRDNIMTDLINWGLDSELSFQIMESVRHGRGIPDDWQAEMKKAKIPDWYIQSCLKI
KYMFPRAHAAAYILMALRIAYFKVYFPLVYYASYFSVRADDFDIVSMCRGKEAVKNAMRL
INDKGMEASTKEKNLLTVLELANEMLERGFKFQMVDLNKSDASQWLIDGDTLIAPFNSVP
GLGLNVAKQIVAAREDKPFISKEDLAKRGKVSKTLIDFMTENNVLAGLPDENQLSLFDLM
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttggatcgaaaagaattgtttgagaagttgttggaacaacttcaatggccacag
gcaagtgagttgccatactttcaaggtgccaaaatcgatcgcttggaagttcataaacaa
agtcaacgttggcagtttgatatttctatccccaagattctgcccttcgaggtctttaac
gattttaatgcgcggctacattcagcttttcaggatattgccaccgtttcgttggatatt
tctgtagaaaatgataccttcacggaacagttgttacgacaatactggcagtgggcggtt
cctaacagtggggtgacatcgccgttattgaaggaattatgcgctgacaagtatccgtca
attgtggattccagagtcgaatttgttgccgagaacgacattgtcaaagattttatgacc
aataccgctttgggaccaatcgaagaaatgtatcaacgcgccggattccctgattttact
attcatacgatcgttgatgaaagctcatctcagcagaatattcaggcgcttaaaaagaaa
aatgaagctgcgaatgcggagctggtcaaaaaggccaacgaagccattcaggaaaatgca
aaagcccatcccaagcgctccggtggaaatggtggtaagaccaccattggccgaaaaatt
aaagatgatctgcccattaccaaaatggaagacattgttgaagaggaacgctcagtggtc
gtttccgggtttgtattcaataaagaaattcgttctttgcgttcgggacggcagttactg
atgttaaaaatcactgactacacttcttcaatccaggtcaagaagttttccaacaagggt
gaagaagcgttatttgaggatgttaacgaaggcaattgggtcaaggtgcggggcagtgtc
caagaagacaactactctcatgagttgacgttgaatgcttacgatattaatcccgttaag
acagtcagtcgaaaagatcaggcacctgagggcgaaaaacgggttgaacttcatctgcac
accacgatgagtcagatggatgccaccaataacattgcggattttgccaaacaagctgcc
aatttcggccagaaagcattggccatcaccgatcatgcgggcgtccaaggatttccggat
gcttttcacgctggtcaaaagaataagattaagatgctttacggagttgaggtcaacttg
gtagatgacggggttccgattacctacaatgacaaacacgtgccattaaaggacgcaacc
tacgtcgtctttgatactgaaacaaccggcctgtcggcaatctacgaccgcgtcatcgaa
ctttctgcggtcaaaatgcaaaacagtaacgttattgaccagttcgaagaatttattgat
ccgggttttcacttatctgaaagaaccactaatttgacgtcaatcacagatgaaatggtc
cacggttcgaaatctgaagaagaagtatttaaattattcagagaattttgcggagacgca
attgtcgttggtcataatgtgacatttgatatgggattcatgaatacggggtatgtaaga
cacggaatgccggaaatggcgaacccgatcatcgataccctgactttggcacgattctta
tatccaaatctgcgtggctatcgtttaaatacattggccaagaagtttgatgtcagtctg
gagcaccatcaccgagccatttatgatgcggaaacaactggacatttgaactatttgttc
ttaaaggatgctgaagatcgttacggcatcgcctatcatgatcagctcaacgatcatatg
actgacaatgacgcctatcgtcacgcgcgtccgtcccatgcaatcttacttgccaagact
caggcgggactgaagaatatgtttaagattgtttctttgtcaaatgttgaatatttctat
cgggttccaagagtgccacgaacccaacttgaaaaataccgggatggcattattgtcggt
tccgcctgttcttctggggaagtctttacgtcgatgatgcaaaagggtatcgacgaagca
cggcaaaaggctgcgttttacgattatttagaggtccaacccaagcgggcatatgcgccg
ttgattgagtctggcttgatttctgatgaaaataacttggagcagatcttaaccaacatg
gttaagttgggcgaagagctcaaaaaaccggtagtggcgactggggatgttcattatctg
aacccgcaggattatatctatcgaaagatcttgattaattctcagggtggtgctaatcct
ttgaaccgccaagagttaccggatttacattttctaaccacggatgaaatgttgggcgac
tttgcatttttaggcgctgaaaaggccaaagaaattgtcgtcaccaataccaacaaaatt
gcggatgaaattgacgacgtccacccgctgaaagacaaattgtatacaccaaaaatggaa
ggtgccgaggatgaaattaaatttcggacgatggataccgcccacaaatggtatggggac
ccacttcctaagattgtcgccgatcgacttgataaggaactcaaaagtattattggtaat
gggttctcggttatttatttgatcgcccaacgattggttgctaaaagtaataaggatggg
tatttggtaggttctcgtgggtcagtcggatccagcttggttgcgacccttaccgggatt
actgaagtgaacccattgcagccgcactaccgttgtccgaattgccagcacactgaattc
tttaccaagggtgagtacagctcaggttatgatcttccccacaaaaactgtccagagtgc
ggaaccaaaatgattggtgacgggcacaacattccctttgaaacattcttaggatttacc
ggaaataaagttcctgatattgatttgaacttttctggggattaccagccaattgcccat
aactacacaaaagtgttgtttggcgagaaaaatgtttttcgtgccggaacgattggaacg
gtggccgataagaccgcttatggttacgtgaaggcctttgaacgggataccggtcaagtc
taccgtcaagctgaagaagatcgattagccaagggtgcgaccggggttaaacggacaacc
ggccaacatccggctggcattatcgttgttcccgattacatggacatttatgatttcacg
ccaatccaatatccggccgatgatcaggatgctgcttggaagacaacccattttgatttc
cattcgattcatgacaatattttaaaaatcgatattttaggacatgatgatcccaccatg
atccgaatgctgcaagatttatcaggaattgatccaaagacgattccaatggatgacccg
ggtgtcatgtcgatcttttcgagcccagagattttgggtgtcaaagaagaccagattcaa
tcaaagaccgggactttgggagtgccggaatttgggacgcggtttgttcggggaatgttg
gaacaaacacatccaagcaattactccgaactgcttcaaatctctggactatcgcacgga
accgatgtttggattggcaatgccgacgaattgattaagaacggaacagcaaccattgcc
aatgtgattggttgtcgggataacattatgactgatttaatcaattgggggcttgactcc
gaattgtcattccagattatggaaagtgtgcgtcatggtcggggaattcctgacgactgg
caggctgagatgaagaaagccaagattccagactggtatattcaatcctgcttgaaaatc
aagtacatgttcccacgggcccatgcggcggcttacattttgatggcgttgagaattgct
tacttcaaggtttatttcccattggtctattacgcttcttatttctcggttcgagccgac
gattttgatatcgtttcgatgtgccgtggtaaagaagcggttaaaaatgccatgcggttg
attaacgacaaagggatggaagcatccacaaaagagaagaatttgctgacggtccttgaa
ttggcaaatgaaatgctcgaacggggctttaagttccaaatggttgacctgaacaaatcc
gacgctagtcaatggctgattgacggtgataccttgattgcaccgtttaattcggtccca
ggactgggattaaacgttgccaagcaaatcgttgccgcccgggaagacaagccgtttatt
tccaaagaggacttggctaaacggggcaaggtttcaaagactttgatcgactttatgact
gaaaacaatgttctggcaggtctccctgatgagaaccaattaagcttatttgatttgatg
taa
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integrated database retrieval system
