Lacipirellula parvula: PLANPX_5473
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Entry
PLANPX_5473 CDS
T06590
Name
(GenBank) hypothetical protein
KO
K19049
chondroitin AC lyase [EC:
4.2.2.5
]
Organism
lpav
Lacipirellula parvula
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PLANPX_5473
Enzymes [BR:
lpav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.5 chondroitin AC lyase
PLANPX_5473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_8
Lyase_8_N
Lyase_8_C
PATR
PEP-CTERM
Motif
Other DBs
NCBI-ProteinID:
BBO35861
UniProt:
A0A5K7XKY1
LinkDB
All DBs
Position
6085787..6089812
Genome browser
AA seq
1341 aa
AA seq
DB search
MRCRPRPSLSELVNVLHRSRVISITVRVAILAIAPALTVSFVRPIYADDLSTVRDRLMAD
LLSSVPSASTVNGYRSSLSANGSWSDVNYGSQSRVDWEPMTHLTRLTAMAEAYSSSSNSL
YQNTALRDDILKAYDYWISRNPLSDNWYYNEISAPQELGNAMVLINSALSSSRRNSGLDI
LERAYRSRSSTSLNTGMNRVERATAGISRGIVAGSNSITADAFAAIGDTLVVTTGEGIQR
DGSFHQHGRQLYNQGYGSSFIGGVTQALELNGGTSFAFASDNQRALIDYMLDGTQWMVRG
QVVDYTASGREITRKGQDDNAAALSGRLKTIIDSTLGYRAAELTAFRERILAANSSGAAS
PTLALSGNKHFWRSDFTVHQRPDFYASVKLSSTRTVQPETGNDEGLKNLYLSDGVNLIMR
TGNEYDNIMPVWNWRRLPGTTVEQDSRSLKPTDDFGVTGTSTYAGGVSDGEYGASAFKYN
RFNVKANKSWFFFDDEFVALGAAIDAPNSVNNVNTTVNQTLLKGTVSYKTADSAARQTIT
LGQTVTPANLEWVFHDGVGYFFPTPVSNATFRAYTQTGTWESINERYDDTAVSKDVFTLY
VNHGNGFTGGSYNYIAVPGLTVGDMDSYLAANPIEVLRNTSAVQAVRQSSLDVTQAAFYS
ASSLNLGGGQSFAVSDPSTVIMRRPNNALQLTASSPEAKSLPLDIDLNSVKFATNGGSWL
DGFGKSATVTLGLPGGDRAGASVGIAISTDAAATPTIRFTTFDQPTTFSYVSDAPLALPA
NTTLYAGSNKTLTFNGAITGNASLTKSGESDLNLKGANGYRGGTTVLGGDVAVSGDQREA
DGGWTVGPSNASDVTVDFLANAKINVSAAGRVHLGNTTPSGEGKNILNAAGTVVNEGALY
VGRNATVNVTGEWTQTGPLSIVARGSSPFSPVLAVPNGGAFNYAGTTNIKMDPAPDSTGV
ASLIIGDGSGAGVFSTSRGFERTVPTGDGASVITLQNNGKLALTADVPQLTTGQFQFQLG
AVAGVVDTKSYYAGLSTPITNQSGKIGGLTKRGNGTLELFVASQYQGETLVGNGTLKVSN
TTGSATGTGAVVVEAGASLTGSGAISGAVALQAGGSIAPGATTGTLTTGAQTWSGGGAFC
FEVASVDPSQTSQSAKRGLLGGADWLAVNGSITISATAANPFVINLAGLMGDVLGSVEAW
NAARNYTWTLATASGGISGFAADRFVIDAADFAATNDVNGVWSINRLGNSLLLEYAANGV
AGDFDDNGLVDGADFLAWQRGFGSNYSESDLETWRASFAAASFATATPVPEPAAIHLLAL
AAFAGAWSVRQRLATTSGELA
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgccgtcccaggccttctctttcggagcttgtgaacgtgcttcatcgctcacgt
gttatatcgatcactgttcgcgttgccattctagccatcgcgcctgcgctgacggtaagc
ttcgtgcgccccatttacgccgacgacctgtcgaccgtgcgggaccgcctgatggcggat
ctgttgagttccgtcccctcggcgtcgactgtcaacggctatcgctccagcctcagcgcc
aatggaagttggtcagatgtgaactacggctcgcaatcgcgcgtcgactgggaaccgatg
acgcacctgacgcgtctcaccgccatggccgaggcgtattcgagcagttcgaattcgctc
taccagaacacggcgctccgcgacgacatcctgaaagcgtatgactactggatcagtcgc
aatccgctgagcgacaactggtactacaacgaaatctcggcgccgcaggaactcggcaat
gcgatggtgctgatcaacagcgcgctctcgtcgtcccggcgaaacagcggcctcgatatt
ctggaacgcgcttatcgctcgcgcagcagcacgagtctcaacaccggcatgaatcgcgtc
gaacgcgcgacggccggcatcagtcgcggcatcgtcgccggcagcaacagcatcacggcc
gacgcttttgccgcgatcggcgacacgctcgtcgtaacgaccggcgagggaatccaacgc
gatggatcgtttcaccaacatggccggcagctttacaaccaagggtatggctcgtcgttc
attggcggcgtgacgcaagcgctcgaactcaacggcggcacgagcttcgcattcgccagc
gacaatcaacgggcgctcatcgactacatgcttgacggcacccaatggatggtccgcggg
caggtggtcgactacaccgccagcggtcgcgagatcactcgcaaaggccaagacgacaac
gccgccgcactttcgggccggctaaaaacaatcatcgactcgacgctcggctatcgtgcg
gcggaactcacggcgtttcgcgagcggatcctcgccgccaactccagcggcgccgcgagc
ccgacgctcgcgctgagcggcaacaagcatttctggcgttctgatttcaccgttcaccag
cggcccgacttctacgcttccgtcaagctttcgtcgacgcggacggttcaacccgaaacc
ggcaacgacgaggggttgaagaacctctacctaagcgacggcgtcaacctcatcatgcgg
accgggaatgagtacgacaacattatgccggtctggaattggcggcggttgcccggtacc
acggtcgagcaagattcgcggtcgctcaagccgaccgacgacttcggcgtcacgggcacc
agcacctacgccggaggcgtctccgatggcgagtacggcgcctcggcgttcaagtacaac
cgcttcaacgtcaaagcgaacaagtcttggttcttcttcgacgacgaattcgtcgccctc
ggcgcggcgatcgatgcgccaaactcggtcaacaacgtcaacacaaccgtcaaccagacg
ctcctcaaaggaacggtcagctacaaaacagccgacagcgccgctcggcaaacgatcaca
ctcggtcaaaccgtaacgccggccaatctggagtgggtctttcacgacggcgtcggttac
tttttccctactcccgtgagcaatgcgacgttccgtgcgtatacgcagacgggcacctgg
gagtcgatcaacgaacgctacgacgacaccgcggtcagcaaagacgtcttcacgctctac
gtgaatcacggtaatggttttaccggcggttcgtacaactacattgccgttcctggcctc
accgtcggcgatatggatagctacctcgcggccaatcccatcgaagtcctgcggaacacg
agcgctgtgcaggcggtgcgacaatcgagcctcgacgtgacgcaggcggcattttactcg
gctagctcattgaacctgggcggcggccaatcgttcgccgtgagcgatccctcgaccgtc
atcatgcggcggccgaacaacgcgctgcagttgaccgcgtcgagtcccgaagcgaaatcg
ctgccgctcgacatcgatctcaacagcgtcaagtttgcaacgaacggcggcagctggctc
gatggcttcggcaaatcggcgacggtcacgctcggactccccggcggcgatcgcgctggg
gcctcggtcggcatcgctatcagcaccgacgccgccgcaacgccgacgattcgcttcacg
acgttcgatcagccgacgacctttagttatgtttcagacgccccgctcgcgctccccgcg
aacacgacgctctacgccggcagcaacaagacgctgacgttcaacggcgccatcaccggc
aacgcttcgctcaccaaatcgggcgagagcgacctgaatctcaaaggagccaacggctac
cgcggcggaaccaccgtcctcggcggcgacgtcgcggtgagcggcgatcaacgcgaagcg
gacggcggctggaccgtcggccccagtaatgcgtccgatgtgacagtcgacttcctcgcc
aacgcgaagatcaacgtcagcgctgccggtcgggttcaccttggtaacacaacgcccagc
ggcgaaggcaagaacatcctcaatgccgcgggaacggtcgtcaacgagggtgcactatac
gttggcagaaacgcgacggtgaacgtgacgggcgaatggacgcaaacgggcccactctcc
atcgtggcccgcggcagtagtccgttctcgccagtgttggcggtccccaacggaggcgcc
ttcaactacgctggcacgacgaacatcaaaatggatcccgcgcctgacagcaccggcgtc
gcttcgctgatcatcggcgacggcagcggggcgggcgtcttcagcacttcgcgcggcttc
gagcgaaccgtccccaccggtgatggcgccagcgtcatcacgctgcaaaacaacggcaag
ctcgccctcactgccgatgtaccgcaactcacgacggggcagttccaattccaactcggc
gccgtcgccggcgtcgtcgatacgaagagctattacgcgggcctgagcacgccaatcacg
aatcagtcaggaaaaatcggcggactgacgaaacgcggcaacggcacgttagaactcttc
gtcgctagccaatatcaaggcgagacactcgttggcaacggcacgctgaaagtgagcaac
acgactggatcggcaaccggcacaggcgccgtcgtcgtcgaagctggcgcctcgctgact
ggcagcggtgcgatcagcggcgccgttgcactgcaggccggcggctcgatcgctcccggc
gccacgactgggacactcacgaccggcgctcaaacgtggtcgggcggcggcgcgttctgc
tttgaagttgcttccgtcgatcccagccaaacgtcgcaaagtgccaaacgcgggctcctc
ggcggcgccgactggctcgcggtcaatggctcgatcacgatcagcgccactgcggcgaac
ccgttcgtcatcaacctcgccgggttgatgggcgacgtgctcggcagcgtcgaggcctgg
aacgctgctcgcaactacacatggacgctcgctacggctagcggcggcatcagcggcttc
gcagccgatcgcttcgtgatcgacgccgccgacttcgcggcgaccaatgacgtcaacggc
gtctggagcatcaaccgcttaggcaactcgctcctcctcgaatacgccgcgaacggcgtc
gccggcgacttcgatgacaacggcctcgttgacggcgccgattttctggcttggcagcgt
ggattcggcagcaattacagcgagagcgatttggaaacctggcgcgccagctttgccgct
gcctcctttgccacggcgacgcccgttccagagcctgctgccatccatctgctcgcgctc
gccgcattcgctggcgcatggtcggttcgtcaacgacttgcaaccacctctggcgaactc
gcctga
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