Lolium perenne (perennial ryegrass): 127292562
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Entry
127292562 CDS
T08650
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
127292562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lper03000
]
127292562
Transcription factors [BR:
lper03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
127292562
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
127292562
NCBI-ProteinID:
XP_051177941
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Position
4:complement(53786005..53790083)
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AA seq
419 aa
AA seq
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MDGNGRSAAYQKKPLSAETDLVELLWHNGGVVAQPQTHPRPAANPCGGQSASGLTGEETA
AWFGDVDGLENEMYAQLWHSIADGPAPLPCPPPPPPHQAARPPMRSGIGSSWTGGGDIGS
TFCGSSQVPEVPAEGREEGSAALPSEGTRGTSTRDCTATYTGTGTSSSGGSGSNFGGSGL
PSESGHAHKRKGRCRDESACRSEKLQDVEYEATEETKSSRRHGSKRRSRAAEVHNQSERR
RRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQIMWMTTGMAPMMFAGAH
QFMPPMAVEMNSACMPAAQGLNQMARVPYMNHSMSSHIPMNSSGAMNPMYVANQMQNIHL
REASNHFLHPDGGQAAAPQVAGPYAYAPHVAPQNGIPEVPDSTVVPTCGPGQPPTSDGS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggacggcaatgggagatcggcggcgtaccagaagaagcctctcagcgcggaaaccgat
ctcgtggagctgctatggcacaacggcggggttgtggcgcagccgcagacgcacccgagg
ccggcggcgaacccctgcggcggccagagcgccagcggcctcaccggcgaggagaccgcc
gcgtggttcggcgacgtcgacgggctggagaacgagatgtacgcgcagctctggcacagc
attgcggacggacccgccccgctcccgtgccctccgccgccgccgccgcaccaggcggcg
agaccgccaatgaggagcggcatcggctccagctggacgggcggcggcgacatcggttcg
accttctgcggcagcagccaggtcccggaggtgccggcggagggcagggaggaggggagc
gccgcgctgccgtccgagggcacgcgcgggacgagcacgcgcgactgcaccgccacctat
accggcaccggcacgtcgtcgtccggtgggtcagggagcaactttgggggctccggcttg
ccgagtgagagcggccatgcccacaagaggaaggggaggtgcagagacgagtctgcctgc
cgcagtgagaaattgcaggatgttgagtatgaagcgactgaagagacgaaatcatctagg
cgacacgggtcgaagcggaggagcagggcagctgaagttcacaaccagtcagagagaaga
agaagagaccggatcaatgaaaagatgcgctcattacaagaactcataccccactgcaac
aaggccgacaaagcatcaatactagacgaggcaatcgagtacttgaagtccctccaaatg
caagttcagattatgtggatgactacagggatggcgccaatgatgtttgctggtgctcac
cagttcatgccaccgatggctgtggaaatgaattcggcatgcatgcctgcggcacagggt
ctaaatcagatggcaagagtgccatacatgaaccattccatgtcaagtcacatccctatg
aactcatctggagcaatgaaccctatgtatgttgcaaaccagatgcaaaacattcacctg
agggaggcaagtaatcacttccttcacccagatggtggacaagcagcagcgcctcaggta
gcaggaccatatgcttatgcaccacatgtagcaccacaaaacggcataccggaagtccca
gatagtactgttgtgccaacttgtgggcctggacaaccacctacctctgatggaagttag
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