Lolium perenne (perennial ryegrass): 127323898
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Entry
127323898 CDS
T08650
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lper03036
]
127323898
03400 DNA repair and recombination proteins [BR:
lper03400
]
127323898
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
127323898
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
127323898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
CRISPR_Cas9_WED
Prefoldin
Arteri_env
Motif
Other DBs
NCBI-GeneID:
127323898
NCBI-ProteinID:
XP_051207958
LinkDB
All DBs
Position
7:118240530..118265494
Genome browser
AA seq
1573 aa
AA seq
DB search
MASRGSGNWALVEHQHHSRASRVYRFQILLPNGTSTGLTLKDPGEEMPLHDFLDHIRTEL
EDVPMDGDDRRGIDWSGDVYLEDLLDRKIHKELQFSDFLTNSTNILRLQDGEGFVRTFEN
MWDLTPPTELLQELPAEYSTESALADLIDNSLQALWSNGKKDRKLIRITIDQEKMVIFDT
GRGMDGSDENSISKWGTIGSSNHRVFRAKGIGGKAPYLVPFFGMFGYGGTIASMHLGRRA
IVSSKTKESRKVFTLHLSREALLAKSSSKLSWKTAGGVRDPSEEELTLSPHQSFTQVEIQ
GLNRCLEAAKLQRFLKDIYFPYIQYDEDNGSMNTRRPVQFEVNGVDLAEILENEVTVTNL
HSCAGPSFILDVTFSCTSTTAAANSEAHARIKCVYFPIVKGKESIDSILEMLRENASGVK
ENFDKFSRVSIRRLGRLLPDARWGPLPFMEPKQSKGKKAELLKRCCKRVKCFVETDAAFH
PTLSKTDLAQHDLFTKALRRLDGSSRSDSSVEDVNVDVRRGGRSLNVTQLEKQYHDWINN
MHAQYDVEIDEGDNDHTVIINPSNKDRLGISEDVQVIRVYTSVRRKGKTWKRGDHLKIQP
GVLARLKNNFLSLKTIFYATLEYVVGEGLAGDICGEARLICRSIEFSDKQGCLLEEGPDS
MCLNIQESVSFPISMIDNDKCHTMENDSWRQILGKKKEKAPACIEVLRNLQGSDLTIERG
LPFEKVIMAGYKHPREIIAVILPQCATTCSTSPLDKRYILKDDEIEMEMDINHLPGSKKD
HLRANCIYRKLKKPSSRDSINGLYIFQLSEDSSIFTKSGVYQFIFSVRCKDSSIITHETE
ITVRPNSNTRRWQLSSIADCSAGNAVVNIRLGVPVRCLGVRSHDSYGNAIPFQDIRKAVI
TIVDGNYILAQVEDIEVELSSDSMTLNIRDFLFKSSKLDIIRPKYEAMLKISLSDNEFSH
LCPCKVMPGLPSTINMDMCLAWEKNLTPGEVIDDALLEVFDHCGNHVEEGTELIVEIVGF
SFVDKHGHVRKVNSEGFVDLSGLLKVINGFGSQACLKIFHHEKEIFATTFQISIRNLEAV
EVPRSCQAGTLLENIIFEVFDSDGLIDESMHGPHHTLSIRSNEKLVEGAQYTFERGRCIV
SRVPVPREPGTVTFVAYHTHFPDLETTIQIPVYTLDLVPVKGENESEPICSYPTSSVSSQ
NTKSPSQLVLSQSNSLASNILGKFSDEIRAIDSDICSQEVLIKAFDSRKKTLENDIVNLQ
DEISHTAGSATGAIELTRHKIEENVGTAAAVLCTLSSRQCLTDDVVGIVALLGTVADRKM
SRMLSLYLGEDNMLAVVCKTQAAANYFEKYAADGSVDVHFGIHQEAANLGAPIRKRFPII
CLDLIRPYTGGFHLNTKQKPLALPFPHSKGFRGFAVNMINLSPESLTIVTKHGHGLRETL
FYRLFGELQVYETRDDMWQAIRHLKNGAISLDGGIIKGDGMLILGYSDPEVTFPVVPRAA
LDVEEDNSEYVCNKIKTMHAQIGVVKTLENRISAAEEQRQKLVMERNEKKRKFDQISEVL
SQASGSSDHQFYE
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagaggatctggaaactgggctttagtagagcatcaacaccacagccgggca
agcagagtgtaccgctttcagatcctgttgccaaatggcacgagcactggcctcactctc
aaggatcctggagaggagatgccgcttcatgatttcttagatcatattaggacagagttg
gaggatgtccccatggatggtgatgacaggcggggaattgactggagtggcgatgtttat
ctagaggacctactggacagaaagatacacaaggaattgcagttcagtgattttctcacc
aacagtacgaatatattaagactccaggatggtgaaggctttgtcagaacatttgagaat
atgtgggaccttacacctccgactgaactgctccaagagcttccagcagagtatagcact
gagagtgctctcgcagaccttattgacaactcattacaggctttatggtcaaatggtaag
aaagatagaaagctgatcaggataactattgaccaagagaagatggtgatttttgatact
ggtagggggatggacggttcagatgaaaattctatctctaaatggggtacaattggttct
tccaaccacagagtatttcgggcaaaaggtattggcgggaaagcaccatatttagtgcct
ttctttggcatgtttggctatggtggaactattgcgtcgatgcatcttggaagacgtgcc
atagtttcatcgaaaacgaaggaatcaaggaaagtgtttaccttgcatctttcgagggag
gctctgttggcgaagtcctcgtctaaactcagctggaagactgctggaggagttagggat
ccatctgaagaagagttgacactgtcgccacatcaaagttttacccaggtggaaattcag
ggcttgaataggtgcttggaggcagccaaacttcaaagatttctgaaggacatttatttt
ccatacatacagtacgacgaggataatggatctatgaatacaaggaggccggttcagttt
gaggtgaatggtgtagatctagcagaaatactggaaaatgaagtgacagttactaatttg
cactcttgtgctggtcctagttttattcttgatgtaacattttcctgtacttcaacaact
gcagcagctaatagtgaagcccatgcacgaatcaagtgtgtttactttccaattgtcaag
ggaaaagaatctatcgactctattttggaaatgttaagagaaaatgcctcaggggtaaaa
gagaactttgacaaattttcacgtgtgtcaatccgccgacttgggcggttactccctgat
gctagatggggccctcttccttttatggaacctaaacaaagcaaaggaaaaaaagctgaa
ctcctgaagcgatgctgcaagagggtgaaatgttttgttgaaacggatgcagcttttcat
ccaacgctctccaagactgatttagcacaacacgacctttttaccaaggcacttcgccgc
ttggacggcagttctcgtagtgacagttcagttgaggatgttaatgttgatgtccgtaga
ggcggaagatcactaaatgttacccagttggagaagcagtatcacgactggattaataat
atgcatgcacagtatgatgtggaaatcgacgaaggtgacaacgatcataccgttattatc
aacccaagcaacaaggaccgacttggaatatctgaagatgtccaagtcattagagtttac
acctcggtcaggaggaaagggaaaacatggaaaagaggagatcatctgaaaatccaacca
ggagttcttgcacgattgaaaaataatttcctctcattgaaaaccatattctatgcaaca
ttggagtatgttgttggtgaaggacttgcaggagatatttgtggtgaagctcgacttata
tgcaggtctattgagttctctgataagcaaggttgcttacttgaagaaggtcctgatagc
atgtgccttaacatccaagaatctgtctccttccctatcagcatgatagataatgataag
tgtcacaccatggaaaatgattcttggcggcaaatacttggaaagaaaaaggagaaggct
ccagcatgtattgaagtcctaaggaatttgcaaggcagtgatctcactatagaaaggggt
ctaccgtttgaaaaagttataatggctggttataaacatccacgtgaaattatagctgta
atcctaccacagtgtgcaactacttgctccaccagcccccttgacaagagatatattctg
aaggatgatgagatagagatggaaatggacattaatcatttgcctggaagtaaaaaagac
catctccgtgcaaattgtatttataggaagctcaagaaaccctcatcgcgtgatagcata
aacgggctgtatatctttcagttgagcgaagattcaagcatctttactaaatctggtgtt
taccaatttatattctcggttaggtgcaaagattcaagtatcattacgcatgaaacagag
ataacagttcgtccaaactccaatactagacgttggcaactatccagcattgctgattgt
tctgctggcaatgctgtagtaaatataaggcttggggtgccagttagatgtcttggagtt
agaagccatgattcgtatggaaatgcaattcctttccaagatatacgtaaggctgtcata
actatagttgatggtaattatattctggcccaagttgaggatatcgaagtggaactctca
tcagattcaatgactctgaatattagggacttcctgttcaaaagcagcaaattggacata
ataaggccaaagtatgaagcgatgttaaagatatctttatctgataatgaattctctcat
ctatgtccatgtaaagttatgccaggtcttccgtcaaccattaacatggatatgtgcctt
gcctgggagaagaatttaactcctggggaagttattgatgatgcccttctagaggtgttc
gaccattgtggtaatcatgttgaagaagggacggaacttattgtcgaaattgttggattc
tcatttgtagataaacatggacatgttcgaaaggtaaatagtgaagggtttgttgaccta
agtggactacttaaagttattaatggatttggttcacaagcttgtttgaagatttttcat
catgagaaagagatttttgctacaacatttcagatttctatcaggaatttggaagctgtt
gaggttccacgaagttgtcaagctggcaccttattggagaacattatatttgaagttttc
gacagcgatggactgattgatgagtcaatgcatggaccccaccatacactgagcatcagg
tcgaatgaaaaacttgtggaaggagcacaatatacatttgaacgtggaagatgtattgtt
tctcgtgtgccggttcctcgtgaaccaggaacagtcacttttgtggcataccatacacat
tttcctgacctagaaacaacaattcagattcctgtttatactcttgatttggtgcccgtc
aaaggggagaacgaatctgaacctatatgcagctacccaacttcatctgtatcaagtcaa
aatactaaatctccaagtcaactggttcttagtcaatctaacagtcttgcttcaaacatt
ctggggaaattttctgatgagattcgagcaattgattctgatatatgctctcaagaagtt
ctgattaaagcttttgattctcgtaagaaaacactggagaatgatattgtcaatctgcaa
gatgagattagccacacagctggatcagccactggtgcaatagagttgactcgtcataaa
attgaagagaatgttggtactgctgctgctgttctatgcactctctccagcagacaatgt
ttgacggatgatgttgtcggtattgttgctcttctcggaactgttgcagacagaaaaatg
agcaggatgctttctctgtatcttggtgaagacaacatgctagcagtggtttgcaagaca
caggctgctgctaattactttgagaagtatgccgctgatggaagtgtggatgtccacttt
ggtattcatcaggaggcagctaacctaggagctcctataagaaagagatttcctatcatt
tgcctcgatttaataaggccatacactggaggcttccatttgaacacaaagcaaaagccg
ctagctctgccgtttccacattccaagggatttcgtgggtttgcggtgaacatgatcaat
ctttccccagagagtttgacgatagtcacaaagcatggacatggtctccgtgaaacctta
ttttataggctctttggagagcttcaagtctacgaaacacgtgatgatatgtggcaagcc
attcgtcatctgaagaatggggctatatctttggatggtgggattataaagggtgatggc
atgctgatccttggatacagtgacccagaggtgacttttcctgttgttccacgtgctgct
ctggacgttgaggaagacaactctgaatatgtgtgtaacaaaataaaaacgatgcatgca
cagattggtgttgtaaaaactttggagaacaggataagtgcagcagaagagcaacggcag
aaattggtgatggagcgcaacgagaaaaaacgcaagtttgatcagatatcggaggtactg
agccaggccagtggcagtagcgaccaccagttttatgagtaa
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integrated database retrieval system
