Lolium perenne (perennial ryegrass): 127341399
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Entry
127341399 CDS
T08650
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03420
Nucleotide excision repair
lper04120
Ubiquitin mediated proteolysis
lper04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127341399
04120 Ubiquitin mediated proteolysis
127341399
09124 Replication and repair
03420 Nucleotide excision repair
127341399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lper04121
]
127341399
03400 DNA repair and recombination proteins [BR:
lper03400
]
127341399
Enzymes [BR:
lper01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
127341399
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127341399
Multi subunit type E3
SCF complex
Ring finger protein
127341399
Cul2 complex
127341399
Cul3 complex
127341399
Cul4 complex
127341399
Cul7 complex
127341399
Cul8 complex
127341399
Cul9 complex
127341399
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
127341399
TCR (transcription coupled repair) factors
Cul4-CSA complex
127341399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
127341399
NCBI-ProteinID:
XP_051223193
LinkDB
All DBs
Position
3:complement(45570174..45573562)
Genome browser
AA seq
125 aa
AA seq
DB search
MSAMETDAADVKPPLLPAPAAEGSSAAGPSSSRKPAKRFEIKKWNAVALWAWDIVVDNCA
ICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEF
QKYGH
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccatggagaccgacgccgccgacgtgaagccgccgctcctccccgcccccgcc
gccgagggctcctccgccgccgggccctcctcctcccgcaagcccgccaagcgcttcgag
atcaagaagtggaacgccgtcgcgctctgggcgtgggatatcgtggtcgacaactgcgcc
atctgccgcaaccacatcatggatctatgcatcgagtgccaggcgaaccaggccagcgcc
accagcgaggagtgcaccgtcgcgtggggtgtctgcaatcatgctttccacttccactgc
atcagcaggtggctcaagactcgccaagtgtgcccattagacaacagcgaatgggaattc
cagaaatatggccactag
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