Lolium perenne (perennial ryegrass): 127342743
Help
Entry
127342743 CDS
T08650
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper00906
Carotenoid biosynthesis
lper01100
Metabolic pathways
lper01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
127342743
Enzymes [BR:
lper01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
127342743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
GIDA
FAD_binding_2
Thi4
Pyr_redox_3
NAD_binding_8
FAD_binding_3
Lys_Orn_oxgnase
Motif
Other DBs
NCBI-GeneID:
127342743
NCBI-ProteinID:
XP_051224710
LinkDB
All DBs
Position
3:180193600..180197855
Genome browser
AA seq
541 aa
AA seq
DB search
MEFTGATISAPFGCRALRGGGPLRTPGWGADGRRRRVSSGPGAEQSRSWKVTCVATEKPD
EKAAAAAAGLQVDFADEEDYVKGGGGELLYVRMQATKAMDSQSKIASKLSPIASETSVLD
LVIIGCGPAGLSLAAESAKKGLTVGLIGPDLPFTNNYGVWEDEFKDLGLESCIEHVWKDT
VVYLDRNKPIMIGRAYGRVQRDLLHEELLRRCHEAGVTYLNSKVEQIIESPDGHRIVYCE
PDQKILCRLAIVASGAASGKLLEYEVGGPRVCVQTAYGVEVEVEHYPYDPSLMVFMDYRD
CFKEKFSNPEEENPTFLYAMAMSSTRIFFEETCLASKDAMPFDLLKKRLMYRLDAMGVRI
LKVYEEEWSYIPVGGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISDIL
RNRVHSEQYLPGSSQGPSPSMLAWRTLWPPERKRQRSFFLFGLALIIQLDNEGIQTFFET
FFRLPKWMWRGFLGSTLSSVDLMLFALYMFAIAPNKLRMNLVSHLLSDPTGSAMIRTYLT
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggagttcaccggcgcgactatctcggcgccgttcggctgccgggcgctgcggggcggc
gggccgctgcggacgcccggctggggcgccgatggcaggaggaggcgggtcagttcgggg
cccggggcggagcagtcgaggagctggaaggtgacctgcgtggcgacggagaagcccgac
gagaaggctgcggcggcggcggcggggctgcaggtggacttcgccgacgaggaggactac
gtcaagggcggcggcggcgagctgctctacgtgcgaatgcaggccaccaaggccatggac
agccagtccaagatcgcctccaagctgtcgcctatagcttctgaaacttcagtacttgat
ttggttatcattggttgtggtcctgctggtctatctctggctgcagaatcggcaaagaaa
ggactcactgtcggcctcattggccctgatcttccattcacaaacaactacggtgtatgg
gaggacgaattcaaagatctcggtctggagagctgtattgagcatgtctggaaggatact
gttgtgtacctagaccgtaacaagccaataatgattggccgagcatatggacgggtgcag
cgagacttgctgcatgaggagttgctgagaagatgccatgaagctggtgttacatacctc
aactcaaaggtggaacagataatagaatctccagatggtcatcgaatagtatattgtgag
ccggaccagaagatactttgcagacttgccattgttgcatctggagcagcatctggtaag
ctactagagtatgaggttggaggaccgcgtgtttgtgttcagactgcatacggtgtagaa
gttgaggttgaacattatccgtacgatcccagcttaatggttttcatggactacagagat
tgtttcaaagagaaattctccaatcccgaggaagaaaatccaacgtttctctatgccatg
gccatgtcttccacacgaattttcttcgaggaaacatgcttagcttcaaaagatgcaatg
ccgtttgatctcctcaagaagaggttgatgtatcggctggatgcgatgggagttcgtatc
ctaaaagtatatgaggaggagtggtcctatattcctgttggtggatccttacctaacaca
gaccagaaaaatcttgcatttggtgctgcagctagtatggtccatcctgcaactggatac
tcggtggtcagatctttgtctgaagctccaagatatgcttctgtcatatctgatatctta
cgaaatcgtgtccattctgaacaatatttgcctggaagttctcaaggccccagtccatca
atgctcgcatggagaacgctgtggcctccagaacggaagcgtcaacgctcattcttcctc
ttcggattggccttgataatacaactggataacgaaggcatccaaacattcttcgaaaca
tttttccggttgcccaaatggatgtggcgaggattccttggctcgacactttcatcagtg
gatctcatgctctttgcgctctacatgtttgcaattgcgcctaataagttgcgaatgaac
ctcgtcagccacctcctctctgacccgactggatccgcgatgatcaggacctacctgacc
ttgtaa
DBGET
integrated database retrieval system
