Lolium perenne (perennial ryegrass): 127344263
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Entry
127344263 CDS
T08650
Name
(RefSeq) sm-like protein LSM3B
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03018
RNA degradation
lper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127344263
09123 Folding, sorting and degradation
03018 RNA degradation
127344263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127344263
03041 Spliceosome [BR:
lper03041
]
127344263
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127344263
mRNA degradation factors
5'-3' decay
Lsm complex
127344263
Spliceosome [BR:
lper03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127344263
Complex C
U2 snRNP components
127344263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
TIG_SUH
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
127344263
NCBI-ProteinID:
XP_051226454
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All DBs
Position
3:complement(284504108..284506398)
Genome browser
AA seq
98 aa
AA seq
DB search
MASAEEEIAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTV
EIDDETYEEIVRTTRRTIPFLFVRGDGVILVSPPLRTA
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagcggaggaggagatcgcggtgaaggagcccctggatctgataaggctcagc
ctcgacgagcgcatctacgtcaagctccgctccgaccgcgagctccgcggcaagctccat
gcatatgatcagcacttaaacatgatccttggagatgttgaggagattgtaacaactgtt
gaaatcgatgatgaaacatatgaagaaatagtgcggactaccaggcgtaccatccccttc
ctttttgtccgaggagatggtgttatattggtttctccgcctctgcgaactgcgtga
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