KEGG   Lolium perenne (perennial ryegrass): 127344263
Entry
127344263         CDS       T08650                                 
Name
(RefSeq) sm-like protein LSM3B
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper03018  RNA degradation
lper03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lper00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127344263
  09123 Folding, sorting and degradation
   03018 RNA degradation
    127344263
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lper03019]
    127344263
   03041 Spliceosome [BR:lper03041]
    127344263
Messenger RNA biogenesis [BR:lper03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     127344263
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     127344263
Spliceosome [BR:lper03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    127344263
 Complex C
  U2 snRNP components
    127344263
SSDB
Motif
Pfam: LSM TIG_SUH Glutaredoxin
Other DBs
NCBI-GeneID: 127344263
NCBI-ProteinID: XP_051226454
LinkDB
Position
3:complement(284504108..284506398)
AA seq 98 aa
MASAEEEIAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTV
EIDDETYEEIVRTTRRTIPFLFVRGDGVILVSPPLRTA
NT seq 297 nt   +upstreamnt  +downstreamnt
atggcgtcagcggaggaggagatcgcggtgaaggagcccctggatctgataaggctcagc
ctcgacgagcgcatctacgtcaagctccgctccgaccgcgagctccgcggcaagctccat
gcatatgatcagcacttaaacatgatccttggagatgttgaggagattgtaacaactgtt
gaaatcgatgatgaaacatatgaagaaatagtgcggactaccaggcgtaccatccccttc
ctttttgtccgaggagatggtgttatattggtttctccgcctctgcgaactgcgtga

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