Lolium perenne (perennial ryegrass): 127346894
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Entry
127346894 CDS
T08650
Name
(RefSeq) transcription factor APG isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04075
Plant hormone signal transduction
lper04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
127346894
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
127346894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lper03000
]
127346894
Transcription factors [BR:
lper03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
127346894
SSDB
Ortholog
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_IRO3
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
127346894
NCBI-ProteinID:
XP_051229100
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Position
1:37216454..37218859
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AA seq
498 aa
AA seq
DB search
MLLLRRSHQQPGNDLPELLWQNGPALQRTAAAPFPPFASSAAGTSTSGRAPDLARHHPAS
ATAMRDLLGAPDDDAVPWLHYPVMGGVDDDDSDTAPLPPEYCSTLLSGYPDLPAAVEGAP
ATSHCAVAVPAPMPEPAVPRHQQQARPSAEGIMNFTFFSRPLQRAPPPANERTSAAAAPS
NPVESTVLQASTNRLRSTPLFSEQRMAWLQPPKDSRATVAPVPPPPPPTPPVPIRQGEAS
AAFAQRVQPEARAALERAPPQPPATATTSSVCSDNVDRSQLKRNSSSHQAPEWSVSQEDE
DLDDEAGGLRRSASRSTKRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASML
EEAIEYLKTLQLQVQMMSTMGTAGLCMPPMLAMQHMQMQMPPMAHFHHHHLGPMGYGMAA
FDPRLAAAAAGAAQFPYPMIPGMPMFGHGPAMPSPPPFPQQAAAADAQMAAGTVVDNDAA
APAEQQTSGDHPQVPGAM
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgcgtaggagtcatcagcagccggggaacgacctgccggagcttctctgg
cagaacggcccggcgctccagcggacggcggcggcaccgttcccgccattcgccagcagc
gcggccggcaccagcaccagcggcagggcgccggacctcgccaggcaccacccggcgtcc
gcgacggcgatgcgcgacctcctcggggcgccggacgacgacgccgtgccgtggctgcat
taccccgtcatgggcggcgtggacgacgacgacagcgacacggccccgctgcccccggag
tactgctccaccttgctctccggctaccccgacctccccgctgccgtcgaaggggcgccg
gccacgtcccactgcgcggtcgccgttccggctccgatgccggagccggcggtacccagg
caccagcagcaggctcggccgagcgccgagggcatcatgaacttcaccttcttctcgagg
cctctgcagcgcgcaccgccgccagccaacgagaggacatccgccgcggccgcgccgagc
aaccccgtggagtcgacggtgctgcaggcgtcgacgaaccggctgaggagcaccccgctc
ttctccgagcagaggatggcgtggctgcagccgcccaaggactcgcgcgccacggtagcc
cctgtaccaccgcctcctcctccgacgccgccggtccctatccggcagggagaagcgtct
gcggcctttgctcagagagtacaaccggaagcgagggcggctcttgagagggcgccgcct
cagccgcccgccacggcgacgacctcgtcggtctgctccgacaatgttgaccggagccag
ctgaagaggaacagcagcagccaccaggctccggagtggtcggtcagtcaggaggacgag
gatcttgacgatgaggccggcgggctgagaaggtcggcgtccaggagcaccaagcgcggc
cgcaccgccgaagtgcacaacatgtcggagcggaggagaagggatcggatcaacgagaag
atgcgcgccctgcaagaactcatccccaattgcaacaagattgacaaggcgtcgatgctt
gaggaagccatcgagtacctgaagaccctacagctccaggtgcagatgatgtcgacgatg
gggacggccggcctgtgcatgccaccgatgctggcaatgcagcacatgcagatgcagatg
ccacccatggcgcacttccaccaccaccacctcggccccatggggtacggcatggccgcc
ttcgacccgcgcctcgccgccgccgccgctggtgcggcccagttcccatacccgatgatc
cccggcatgcccatgttcggccacggccccgcgatgccttccccaccgccctttccccag
caggcggctgctgcggacgctcagatggccgcaggcaccgtcgtcgataacgacgccgcc
gccccggccgagcagcagacgtcgggcgaccatccgcaggtcccaggagcaatgtag
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