Lactococcus petauri: lgb_00679
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Entry
lgb_00679 CDS
T08464
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lpet
Lactococcus petauri
Pathway
lpet03420
Nucleotide excision repair
lpet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
lgb_00679 (pcrA_1)
03430 Mismatch repair
lgb_00679 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpet03400
]
lgb_00679 (pcrA_1)
Enzymes [BR:
lpet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
lgb_00679 (pcrA_1)
DNA repair and recombination proteins [BR:
lpet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
lgb_00679 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
lgb_00679 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
Com_YlbF
Motif
Other DBs
NCBI-ProteinID:
UQU59919
LinkDB
All DBs
Position
699260..701554
Genome browser
AA seq
764 aa
AA seq
DB search
MNPLLNGMNEKQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMVNPWNILAITF
TNKAAREMRERALNLTPAAQDTLIATFHSMCVRILRRDADHIGYNRNFTIIDPGEQKTLM
KRILKEANLDPKKWEPKTLLNTISNAKNDLLDPEAYEGQINARNPYELLTARVYKTYQAE
LRKAESMDFDDLIMQTLRLFDKNPDVLAYYQGKFQYIHVDEYQDTNHAQYQLVKLMAQRF
KNICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKTILQAANNVINNN
VNRRPKKLWTQNNDGENILYYRANDERDEAIFTASTINEQVQAGRKYSDFAVLYRTNAQS
RTIEEAFLKSNIPYSMVAGTKFYSRKEIRDVISYLNVIANPRDNMSFERIVNEPKRGVGP
SALEKLRNFADMQGKSLAESTLDITLSDIRGKAAGEIYNLGLIFDFLRSFIETSSITELV
EEMLDRTGYMKFLRMQANLEAQTRIENIEEFLSVTKNFDEKSEVPLDEMTGEPIKETGLD
RLSRFLNEVSLLSEVDEYEEASDAVTMMTLHAAKGLEFPVVFLIGMEENIFPLSRVNDDP
DELEEERRLAYVGITRAEEFLYMTNANQRVLYGKTSYNRPSRFISEIDDELLDYGGIARK
ANSSFNASYKMAGGATRFGTGMSMTDALHQRKAAVNPGASRVIEKADVATEDWTIGDTAV
HRKWGEGIVLAVTGTGKNMELKIKFPEVGMKRLLAAMAPIEKKE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttattaaatggaatgaatgaaaaacaagcagaagcagtacaaactacagaa
ggaccacttttgattatggcgggcgcgggttccggaaagacccgtgttttgacacaccgt
attgcttatcttattgatgaaaaaatggtgaatccttggaatattttggcgattaccttt
accaacaaagctgcacgggagatgagagaacgtgcacttaatttaaccccggcagctcaa
gatacattaattgcaacatttcactctatgtgtgtccgaatcctccgacgcgatgcagat
catattggttataaccgtaattttacgattattgatccaggggaacaaaaaaccttgatg
aagcgtattttgaaagaagctaacttggatcctaaaaaatgggaacccaaaacgctcctt
aatacgatttcaaacgctaaaaatgaccttctcgatcccgaggcttacgaaggacaaatc
aatgcgcgtaatccttatgagttactgacagcccgtgtttataaaacctatcaggcagaa
ctgcgtaaagcggagtcgatggatttcgatgatttaatcatgcaaaccttacgtcttttt
gataaaaatccagatgttttagcctattatcaaggtaaatttcaatatatccatgtggat
gaatatcaagatactaaccatgcgcaatatcagctcgtcaagttaatggctcaacgtttt
aaaaatatttgtgtcgttggtgatgctgaccaatcaatctatggctggcgtggtgcagat
atgcagaatattcttgactttgaaaaagattatcccgatgcgaaagttgttttacttgaa
gaaaattatcgttccacaaaaacaatcttacaggctgccaataatgtgataaacaacaat
gtgaaccgtcgtcctaaaaaattatggactcaaaataatgatggggagaatattctttat
tatcgtgccaacgatgagcgggatgaagcaatctttacagcttcgacaatcaatgagcaa
gtgcaagctggacggaaatactctgattttgcagtcctttaccggacaaatgcacagtca
cgtacaatagaagaagccttcttgaagtctaatattccttatagtatggtcgctgggaca
aagttctactcacgtaaagaaattcgtgatgtgatctcttatcttaacgtgattgccaat
cctcgagataatatgagttttgagcggatcgttaatgagcctaaacgtggtgttggtcca
agtgctctggaaaaattgagaaactttgcggatatgcaaggtaaatctttagcagaatca
acgttggatattactttatcggatattcgaggtaaagcagctggcgaaatctacaatctt
gggctaatttttgatttcttgcgtagcttcattgaaacatctagtatcacggaacttgtt
gaagaaatgcttgaccgcacgggctatatgaagttcctacgaatgcaagcaaatcttgaa
gctcagacacggattgagaatatcgaagaatttctctccgtgacaaagaattttgatgaa
aaatcagaagtaccactagatgaaatgaccggagaaccaatcaaggaaaccggtttggac
cgcttgagtcgtttccttaatgaagtgagtcttctttctgaggtggatgaatacgaagaa
gcgagtgacgcggttaccatgatgaccttacatgctgcaaagggtctagaatttcctgtt
gtatttcttattgggatggaagaaaatatctttccactttcacgtgttaatgatgatcct
gatgaattggaagaggaacgtcgtcttgcctatgtgggaatcacgcgcgccgaagaattt
ctttatatgaccaatgcaaatcaacgtgtgctctacggtaaaaccagctataatcgtccg
agccgtttcatctctgagattgatgatgagttattggactatggagggattgcacgtaag
gccaattcaagcttcaatgctagttataaaatggctggaggtgcgacacgatttggtact
ggcatgtccatgacagatgctcttcatcaacgtaaagctgcagtcaatcctggagcatca
cgtgtgattgaaaaagcagatgtagctacagaagattggacgattggagatactgccgtc
caccgcaaatggggtgaaggtattgtgttagctgttactggaaccggtaagaatatggag
ctgaaaattaagtttcctgaagtgggtatgaaacgtcttttggctgcaatggcaccaatt
gagaaaaaggagtag
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