Legionella pneumophila Lens (serogroup 1): lpl0987
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Entry
lpl0987 CDS
T00208
Symbol
lig
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
lpf
Legionella pneumophila Lens (serogroup 1)
Pathway
lpf03030
DNA replication
lpf03410
Base excision repair
lpf03420
Nucleotide excision repair
lpf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
lpl0987 (lig)
03410 Base excision repair
lpl0987 (lig)
03420 Nucleotide excision repair
lpl0987 (lig)
03430 Mismatch repair
lpl0987 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpf03032
]
lpl0987 (lig)
03400 DNA repair and recombination proteins [BR:
lpf03400
]
lpl0987 (lig)
Enzymes [BR:
lpf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
lpl0987 (lig)
DNA replication proteins [BR:
lpf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
lpl0987 (lig)
DNA repair and recombination proteins [BR:
lpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
lpl0987 (lig)
NER (nucleotide excision repair)
GGR (global genome repair) factors
lpl0987 (lig)
MMR (mismatch excision repair)
DNA ligase
lpl0987 (lig)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
lpl0987 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
Nlig-Ia
HHH
PTCB-BRCT
FeoA
DUF4796_N
Motif
Other DBs
NCBI-ProteinID:
CAH15221
Pasteur:
lpl0987
UniProt:
Q5WXV3
LinkDB
All DBs
Position
1111323..1113344
Genome browser
AA seq
673 aa
AA seq
DB search
MNDQGIKESIETLKEQIRKYDYHYYVLDEPLVPDAEYDRCFKALQQYEEQYPQFLSPDSP
TQRVSGTPSDAFMPVAHKQPMLSLSNVFTTDELKAFIKRAIEKLDEPNQQLVFACEPKLD
GLAVNMTYEGGILTHAATRGDGAVGENITANIKTIASVPLRLRVSNPPKLIEVRGEVYIP
KADFEAYNARARELGEKTFANPRNAAAGSLRQLNPEISASRPLAIYCYGIGACEDYKLPN
SHLEQLNLLKEFGFRVSPETRRAVGIEGCLDYYQYMLAKRNQLPFEIDGVVYKIDSISLQ
QQLGYVSRAPRFACAHKFPATEEMTRLIAVDFQVGRTGAVTPVARLEPVSVGGVTVSNAT
LHNFDEITRKDIRIGDTVIIRRAGDVIPEVVSVILEKRPANARMIELPKNCPVCGSEVVR
EADEAIARCVGGLYCKAQLKRMMWHFASRKAMYIEGLGSVLIDQLVDEGIVHHLADLYEL
DLQTLASLPRMGEKSAKNLLSALEKSKKTTFNRFLYALGIREIGEAGARVLAEHYCDVEG
LKAATIEELMTLNDIGPVAASHVVHFFAQAHNLEVIDRLLELGIHWPKSEKIQVNQQNPF
FGKTVVLTGTLSTMGREEAKAKLLALGAKVSGSVSSKTDYVVAGSEAGSKLIKATELGVA
IIEEDEFLKWVNS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatcaaggaattaaggaatcgatagaaacgcttaaagagcaaataagaaaatac
gattatcactattatgttttagatgaacctttggttcccgacgcggaatatgatcgatgt
ttcaaggcattgcaacagtatgaagagcaatatccgcaatttttatcgccggactctcct
acacagagagtgagcggtactccttcagatgcttttatgccggtagcccataagcaaccc
atgttgtctttgtccaatgtgtttactactgatgaattaaaagcattcattaagcgagca
attgagaaactggatgaaccaaatcaacaactggtatttgcttgcgaaccaaagcttgat
gggttggctgttaacatgacttatgagggcgggatcttgactcatgccgcaactcgtggc
gatggtgctgtaggtgaaaacatcacagcaaatattaagactattgcttcagttccatta
aggctaagggttagtaaccctccaaaattgatcgaagtgcggggtgaggtctatatcccg
aaagccgattttgaagcatacaacgcaagggctagagaactcggtgaaaaaacttttgct
aatccgcgaaatgctgctgcaggcagtttaaggcaattaaatcctgaaatttctgccagt
cgcccacttgctatttattgttatggtataggggcttgcgaggattataagttacctaac
agtcatttggagcaattgaatttattaaaagaatttggatttagagtgtctccagaaacg
aggagggcggttggaatagaaggctgtttagattattaccagtatatgttagcgaaacgg
aatcaattgccatttgaaatcgatggggttgtttataagattgacagtatctccttgcaa
cagcaattaggttatgtttctcgtgccccaagatttgcttgtgcccataaatttcccgct
acagaagaaatgacccgtctgatagccgtggatttccaggtaggtagaacgggtgctgtg
acaccggttgcacgtttggagccagttagtgttggtggcgttacagtaagtaatgcgact
ttgcataattttgatgaaattacccgaaaagacattcgtattggtgatacggttattatt
cgtcgtgccggtgatgtgatccctgaagtggtttctgtgattttggaaaagcgtcccgct
aatgccagaatgattgagcttcctaaaaattgccctgtttgtggttctgaagtcgtaagg
gaagccgatgaagcaattgctcgttgtgtcggcggtttatattgcaaagcacaattaaaa
aggatgatgtggcattttgcttctcgaaaagcaatgtatattgaaggacttggcagtgtt
ttaattgaccagttagttgatgagggtattgtccatcatttggcggatctttatgaactc
gacttgcagactttagctagcctgccaaggatgggggagaaatctgcaaaaaacctatta
tccgctttggaaaaaagtaaaaaaacgactttcaatcgctttctttatgctttggggatc
agagaaatcggtgaagccggcgcaagggttttagcggagcactactgcgatgtagagggc
ttgaaagcggcaacgattgaggaattaatgactctgaatgacataggtccagtagcggct
tctcatgtagtccatttctttgcccaagcgcataatcttgaagtgattgaccgtcttctc
gagttgggtattcattggcctaagtccgaaaaaatacaggttaatcagcaaaatccattt
tttggtaaaacagtagttttaactgggactctgagtaccatggggagggaagaggcaaag
gcaaaattattagccttgggcgcaaaagtgagtggaagtgtgtcttccaaaacggattat
gtagtagcaggaagtgaagccggttcaaaactgattaaagcgacagaactgggagtagcg
attatagaggaagacgagtttttaaaatgggttaattcatga
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