Legionella pneumophila subsp. pneumophila HL06041035 (serogroup 1): LPV_3238
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Entry
LPV_3238 CDS
T02174
Symbol
nth
Name
(GenBank) DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lph
Legionella pneumophila subsp. pneumophila HL06041035 (serogroup 1)
Pathway
lph03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPV_3238 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lph03400
]
LPV_3238 (nth)
Enzymes [BR:
lph01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LPV_3238 (nth)
DNA repair and recombination proteins [BR:
lph03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LPV_3238 (nth)
Prokaryotic type
LPV_3238 (nth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
CCD10257
LinkDB
All DBs
Position
complement(3347773..3348408)
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AA seq
211 aa
AA seq
DB search
MNKQKSQEIFKRFQEQNPHPTTELQYSTPFELLIAVMLSAQATDVSVNKATAKLFQVANT
PKALLDLGLDRLKDYIKSIGLYNSKAQNIMKTCEILIDQHEGQVPGQREALEALPGVGRK
TANVVLNTAFGQPTIAVDTHIFRVANRIGIAKGNTPLAVERELLKKVPREFLHDAHHWLI
LHGRYVCTARKPHCKTCIIEDLCEYKDKNLL
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaaaaatcacaagaaattttcaaacgttttcaagaacaaaaccctcatcct
acaacggagttgcaatatagtaccccttttgagttattaattgccgtcatgctttcagcc
caggcaacggacgtcagtgtgaataaagcgacagccaaactattccaggtagccaatacc
ccaaaagccttactggatttgggattagatagattaaaagattacattaagtccataggt
ctttataatagcaaagcacaaaatatcatgaaaacctgtgaaatacttattgatcagcat
gagggacaagttcctggccagagagaggcgctggaagcattgcctggtgttggccgaaaa
actgcaaatgtggttttgaatacagcatttggtcagccaaccatagcggtcgacacccat
attttcagagtggctaaccggattggcatagcgaagggtaatacaccgctggcggttgag
cgggagttattaaaaaaagtgccccgtgagtttttacatgacgcccatcactggttaata
ctacatggccgttatgtctgtacagcgcgtaaaccacattgcaagacttgcatcattgaa
gatctttgcgaatacaaagacaagaatttactttaa
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