Lytechinus pictus (painted urchin): 129259471
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Entry
129259471 CDS
T09066
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes flexible hinge domain-containing protein 1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lpic03036
]
129259471
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129259471
Chromosome and associated proteins [BR:
lpic03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
129259471
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
129259471
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMCHD1_S5
HATPase_c_3
SMC_hinge
HATPase_c
Motif
Other DBs
NCBI-GeneID:
129259471
NCBI-ProteinID:
XP_054753736
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Position
1:26189546..26240591
Genome browser
AA seq
2007 aa
AA seq
DB search
MAATMAGESSMEEDSTVYVFDRRKGSEPERKITLGGVFSFADFKDLIKKEFGIPDNGKFV
IATTNREEINTDEAYEELVEDGDTLYLLVHLKQALLAPTQERVEYQPHFDTLIRSGMYEY
YASEGQNPLPFAIAELIDNSLAATMNNDGPRCIEIRLYLDETGDKSTVCVIDNGKGMTTR
ELNNWAIYRLSKFNRKRRRHKHQENNGDEDREIPKSLNSDISYFGVGGKQAVFFIGDSTR
MISKPKDSKDVHEMTVSKDEFERREKCKEDIYKGIIHNRQPGEGSHLPPEDEILHSLIKE
EEGKENFTHVVITSVKSQHIKFLKEDFTRWSRQLAHIYHYYIHGPSGNQSHLSNSMFRTP
SPYKNIDISITMYKKGHTPRQLNLRDIEDDHQSNFIRSAKDTFEFRVLVEGTGLVEGVLR
YHPFLFDRESFPVDYGLAVQEVDDESDVKRDRPARGNKAIFECYWNGRLIPYTLVQDFDW
CSVPKRRLSIPVECYNRVSGALFANNKFEVSTNKLTFIDLELKLKDKSAVFQRVVGGQPQ
RVKIDKQFTEWLHECHENLDKQVCFRDYVGNIMRHELPKKQQGPWAVFETVEWDGKTYST
GQQVRVLRTSPILHGSIQRFMLFGDFENEIQNGTLFATGGEFEIVQEPRLLYNETKIYPL
SKLDRTADVRQIKKHIDDEEGKLPGVLVISWPEANEVHAGEKRPAGKLIGAIKAEIHNRK
GQSMSRLPGAQHNSKKLMVEMKIIWHSSSGDKVIVTHMSQHHKTWAFWFRQMDIVRNLGP
HTLILQAVLGEEGATDFGGHPLPSHKIKFTSTEGPPSKFSIDILDPPFRVDVPFNIPLQL
QDEFNYPTKPTNSLKPILEASGLAMSYEKTEIKGMSLIVKGVKASGDVGSAQGKNFNLTL
KIPGLEIPTQQLKIRILPGEPHKIIVPTFEETDKLCIENGKXLPISVEIRDGAGNFXMHP
KLIVQCKFLGAVGLPTYTADCSNSGKATLPXNPIFIKNISKKSQKINARIELRHMKGVSS
VEKAIMVTPSTSACKINVFFCQHQHINDPKKKPVKMKPQEEIEWTAGESTSHISFALFDE
GDHHMRITKELANKFKFNWLPSFNPQXLMEGYLPPIKVPNTVGDKTFCQLRLTDGSGLEF
SFYVKPLPGEATQIKCQSKGSKKVKLGETLDGEIVIHVTDAYGNSMKKLPHGSLSNLSVT
ADDLDTKILQKALLPNVGFVLRNVKFDGSAVGVREVMVKYNNFSDHIRLEVLPGKPAKLL
VIGWMPEETLIAYDGAQINNPLGFQVCDEAGNRISNVNSTISLQYDKALKVSSTSSLTAR
PFADGQVSFGKLTLSGPCGKYTLHAKMNLGRSPLTSSGLTVQLKPDPKKAHRLQVDYRKE
RVYIAGNRFPDFDISVIAADESTMTNIAHKKISMRMWKSATKDPHTGPPPSRALITEIDK
PSNEDREGHFYCRRRKLPVEASMHWIIFQASLDQAIFYSEPIGFDIQPGPPVKLIPEIAP
STPTVSNTPRSHSRTLIKALRLQLVDDFGNLTGKDLAGNIEVHMKGSNGAELPKLQGNNS
MMQFPLNKGISFIQNISIQENTPGHDGSEYKLHFSLKSNGPEVKPFIQPFLFYNDAKKQQ
RMSQLSKEKDTLKASIKTYKELFDGKKQLLQMFKESAEDAARHEVQLRGEMKQYGVRVAQ
IATRKGAEEYMTSTQEKMVELRSKPRRQCGMQRYETRDGEILGKVAHLAEVEEENDAYVL
SWHMASDLDCVLTTTVAKAKEVFANTRGRQQVLPIESIYKKGLTEWDKPLPHKRVPMKHG
HTPSGNPVYARHLLRFTGHEANCKIAFSLLLQDTILLDTLDDATAYRQSIVKYIHCPTLL
TRDGNRIRGNGKFGGLQNRCPSDLRGCVFGEPPPKELESLEKQMVILEKIIHAIKSREQA
QVEYKVQEAALRSADMVAKQRDCQEAEEQLALVNQKIKMAESSTTDRSPIPLSTTSSNSR
GQATARGTTRRPAPSVPESPRTKRRKP
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaccatggcaggtgaaagttcgatggaagaagattcgactgtgtacgtgttc
gaccgtcgcaagggctcagaaccagaacggaaaatcacccttggaggagtctttagcttt
gctgattttaaagacttgataaagaaagagtttggtatcccagataatggcaagtttgtc
attgctaccaccaacagagaagagatcaatacagatgaagcttacgaagagctggtggag
gatggagacactctgtatcttcttgtgcacctcaagcaggccttgcttgcccctacccaa
gagagggtggagtaccagcctcactttgacacccttatcaggagtggaatgtatgagtac
tatgccagtgaaggacagaatccattaccttttgcaatagctgaactgatagacaactct
cttgcagccacaatgaataatgatggacccaggtgcatagaaatcagattgtacctggat
gaaacgggggataagagcacggtctgtgtcattgacaatggcaagggcatgacaaccaga
gaactcaacaactgggccatctatcgtctctcaaaattcaaccgaaagaggagaagacat
aaacatcaagagaataacggtgatgaagacagagagattccaaaatctctaaacagtgac
atctcatactttggagttggaggaaagcaagcggtgtttttcattggtgattcaacaagg
atgatcagcaaacctaaggattcaaaggatgttcatgagatgaccgtatcaaaagacgag
tttgagaggagagagaaatgcaaagaagacatctacaagggcatcatccataacagacag
cctggtgaaggtagccatttgccacctgaggatgagatcctacacagtctgatcaaggaa
gaggaaggcaaggagaacttcacccatgtcgtcatcactagtgtcaagtcacaacacatc
aagttcctcaaggaagacttcaccaggtggagcaggcaactagcacacatctatcactac
tacatccatggaccatcaggcaatcagtcccacctgtcgaactccatgtttcgtacaccg
agcccttacaagaacattgacattagcatcaccatgtacaagaagggccataccccacgc
cagctcaacctcagagacattgaagatgatcatcagtctaacttcatcaggtcggccaag
gacacctttgaattccgtgtattggttgaaggaactggtctggtagagggcgtgcttcga
tatcatccatttctcttcgacagagagtcctttcctgtggactatggtttagctgttcag
gaagttgacgacgagagtgatgtcaaaagagatcgacctgcgaggggtaacaaagccatc
tttgagtgctactggaatggaagactcattccatatacacttgtccaagactttgactgg
tgcagcgtgccaaagaggcgactcagcattcctgtcgagtgctacaacagggtgtctggc
gccctctttgccaacaacaagtttgaggtcagcacaaacaagctgaccttcattgacctt
gagctgaagctaaaagataagagtgctgtctttcagagagtggtagggggtcagccccag
agagtcaagatcgacaaacagttcacagagtggctgcatgagtgtcatgagaaccttgac
aaacaggtctgtttcagagactatgtgggtaacatcatgaggcatgaactacccaagaaa
cagcaaggaccgtgggctgtctttgagacggtggagtgggacggaaagacatattccaca
ggacagcaggtacgagtcttgaggacaagtccaattcttcatggatcgatacagcgcttc
atgttgtttggggactttgagaatgagatccagaatgggacattgtttgcaacaggagga
gaatttgaaattgtacaggaaccaaggctattgtacaatgaaacaaagatctacccccta
agtaaactggacaggacagcggatgtgaggcagattaagaaacacattgatgatgaagaa
ggaaaacttccaggagttcttgtcatctcatggcctgaagcaaatgaggtccatgcagga
gaaaaacgaccagctgggaaactaataggtgcaatcaaagctgagatccataataggaaa
ggtcaatccatgtcaaggcttcctggagctcagcataactctaagaaactcatggtggaa
atgaagatcatctggcattccagcagtggtgacaaggtgatagtaacccacatgagtcaa
catcacaagacatgggcattttggtttaggcagatggatattgtaaggaaccttggcccc
cataccctgatactgcaggcagtcctcggggaggaaggagccactgactttggaggtcac
ccactaccaagtcacaagatcaagtttacaagtacagagggtccaccaagcaagttcagc
attgatatcctggatccaccgttcagggtagatgtccctttcaacattcctcttcagcta
caagatgagtttaactatccaaccaagccaacaaacagcctcaaaccaatccttgaagca
agtggccttgccatgagctatgagaaaactgaaatcaagggtatgtctttgatagtgaag
ggagtgaaggcatcgggagatgtaggatcagcccagggaaagaacttcaatctaacattg
aagataccaggactggagatcccaacacagcaattgaagatcagaatcttgccaggtgag
ccacacaagatcattgtgccaacatttgaagaaacagataagctttgcatagagaatggc
aagncgcttcctatatcagtagaaatcagagacggagctggtaacttcnngatgcatcca
aaactcatagtacagtgcaagtttcttggtgcagttggattgcctacatacacagcagac
tgcagtaactcagggaaggcaaccctaccgnncaatcccatcttcatcaaaaacatctcc
aagaaatcacagaagatcaacgctagaattgaattacggcatatgaaaggagtcagcagt
gtggagaaggctatcatggtcacacccagcaccagtgcgtgtaagatcaatgtgttcttc
tgtcaacatcaacacattaacgacccaaagaagaaacctgtcaagatgaaaccacaggaa
gagatcgagtggacggccggagagagtacatcgcatattagttttgctctgtttgatgag
ggtgaccatcacatgaggatcactaaagagttagcaaacaagttcaaattcaactggcta
ccttctttcaaccctcaantcctcatggaagggtacctacccccgatcaaggttcctaat
acggtaggagataagacgttctgtcagctgagactcaccgatggatcaggcctagaattc
tccttctatgtcaaaccactccctggtgaggcaacgcagattaaatgtcagagcaaggga
agcaagaaggtgaagctaggagagaccttggatggtgagattgtcatccatgtcaccgat
gcatatgggaatagcatgaagaagctaccacatggatccttgagcaacctgagtgtgacg
gcagacgatctggacaccaagatcctgcagaaggcacttcttcccaatgtgggatttgtc
cttcggaatgtcaagtttgatgggtcagcggtaggggttagggaagtcatggtgaagtac
aacaacttttctgaccatattaggttagaagtgcttccagggaaacctgccaagctactt
gtgataggctggatgccagaggagacactgatagcatatgatggtgctcagatcaacaat
ccattgggctttcaagtttgtgatgaagctggtaatcgtatctctaatgtcaattcaact
atctcactgcaatatgacaaggcattgaaggtatcgtctacttcatcattgacagcaagg
ccatttgctgatggtcaggttagctttggcaagcttaccttatctggtccctgtgggaag
tatacgcttcatgcgaagatgaaccttggaaggtctcccctcacgagttctggtctcacg
gttcaactcaagccagatccaaagaaggctcacaggcttcaggtggactacaggaaggaa
agagtctacattgctgggaatcgtttcccagattttgatatctctgtaattgctgctgat
gagagtacaatgaccaacattgctcacaagaagatatcaatgaggatgtggaagtcagct
accaaggatccacacactggtccaccaccatcgagggcgctaataacagaaattgacaaa
cccagcaatgaagacagggaaggtcatttctactgcaggaggagaaaacttccagtagag
gccagcatgcactggataatcttccaagcttcattggatcaagcgattttctactcagaa
ccaattgggtttgatatccagcctggtcctcctgtcaaactgatcccagagatagcccca
tctacacccaccgtctctaatacaccacgctcacacagtagaactcttatcaaggctctt
aggctacagctcgtggatgattttggaaatttgactggcaaagatttggcgggtaacatt
gaagtccacatgaagggcagcaatggagcagagctgccgaaactccaaggcaataatagt
atgatgcagtttccgttgaataaaggcattagcttcatacagaacatctctatccaagag
aatacaccaggccatgatgggagtgagtataaactacacttctcactgaagagcaatgga
cctgaagtcaagccattcatccaaccattcctcttctataacgatgctaagaaacagcag
aggatgtcacagctgtcaaaggagaaagacacactcaaggcttctatcaagacatacaag
gaattgtttgatgggaaaaaacagcttctgcagatgttcaaagaatctgctgaggatgct
gcaaggcatgaggtccagttacgtggagaaatgaagcaatatggagtcagagtcgcccag
atagcaacgaggaaaggagcagaagaatatatgacatctactcaagaaaagatggttgag
ttgaggagtaaaccaagaagacagtgtggaatgcaacggtatgagacacgcgatggcgaa
atactcggaaaggtagcacacttagctgaagtagaggaagagaacgatgcctatgtctta
tcatggcacatggcctcggatttagactgcgtcctcaccaccacagtggctaaagctaaa
gaggtgtttgcaaacacaagagggcgccagcaggttctacccatcgagtcaatttacaaa
aagggcctcacagagtgggataagcctcttcctcacaagagagttcctatgaagcatggt
catactccgtcaggcaacccggtctatgcaagacatctactaaggttcacaggacatgaa
gcaaactgtaaaatagctttcagtctcttgctacaggataccatactcttagatacccta
gatgatgcgacagcatacaggcaatcgatcgttaagtacatccactgcccaacgctgcta
acccgtgatggtaatcgtatccgtggtaacggaaagtttggcgggctccagaaccgatgt
ccatcagacctaaggggatgtgtctttggagaacctcctcccaaagagctggaatctctt
gagaagcagatggtaatcctggaaaagatcatacatgccataaagagccgtgagcaagct
caggttgaatacaaggtgcaggaggcggccctaagatcagcggatatggttgccaagcaa
cgggattgccaggaagccgaggaacagcttgctcttgtcaatcaaaaaatcaaaatggct
gaaagttctactacagatcgttccccaattcctttgtctaccacatcttccaactcaaga
gggcaggctacagcaagagggacaacgagaagaccggcgccctctgtaccggaaagtcct
cgaaccaaacggaggaaaccctaa
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