Lytechinus pictus (painted urchin): 129261989
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Entry
129261989 CDS
T09066
Name
(RefSeq) RING-box protein 1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03420
Nucleotide excision repair
lpic04120
Ubiquitin mediated proteolysis
lpic04141
Protein processing in endoplasmic reticulum
lpic04310
Wnt signaling pathway
lpic04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129261989
04120 Ubiquitin mediated proteolysis
129261989
09124 Replication and repair
03420 Nucleotide excision repair
129261989
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129261989
04350 TGF-beta signaling pathway
129261989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lpic04121
]
129261989
03400 DNA repair and recombination proteins [BR:
lpic03400
]
129261989
Enzymes [BR:
lpic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
129261989
Ubiquitin system [BR:
lpic04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
129261989
Multi subunit type E3
SCF complex
Ring finger protein
129261989
Cul2 complex
129261989
Cul3 complex
129261989
Cul4 complex
129261989
Cul7 complex
129261989
Cul8 complex
129261989
Cul9 complex
129261989
DNA repair and recombination proteins [BR:
lpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
129261989
TCR (transcription coupled repair) factors
Cul4-CSA complex
129261989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
129261989
NCBI-ProteinID:
XP_054755990
LinkDB
All DBs
Position
5:42852615..42865899
Genome browser
AA seq
112 aa
AA seq
DB search
MATAMDVDPPSTSSSSSSAKSEKRRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIEC
QANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGR
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcaatggacgtcgatcctccatctacaagctcttcttcgagcagtgctaaa
agcgagaagagaagatttgaagtgaagaagtggaatgctgttgcattatgggcctgggat
attgtggtagataactgtgcaatctgcagaaatcatattatggacttatgtatagaatgt
caagccaaccaggcatcagcaacttcagaagaatgtacagtagcatggggtgtgtgtaat
catgccttccattttcactgcatatcgagatggttgaagactaggcaagtgtgtcctctg
gacaacagagaatgggaatttcaaaagtatggacgctga
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