Lytechinus pictus (painted urchin): 129264539
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Entry
129264539 CDS
T09066
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129264539
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Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-TRAF_2
Sina_ZnF
zf-C3HC4_3
DUF7560
DM
TRAFD1-XIAF1_ZnF
Trm112p
zf_UBZ
zf-C2HC_2
zf-DNA_Pol
Motif
Other DBs
NCBI-GeneID:
129264539
NCBI-ProteinID:
XP_054758396
LinkDB
All DBs
Position
7:complement(20631641..20653596)
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AA seq
626 aa
AA seq
DB search
MQFKDGATPIDIKPIHFECLIINVTILTFIIPSAFNLKSHLNHQVQPKRTSTFNFKINKS
RQGFLSSSMAEKGSEVIPSIKSLQSDTGESEAQPGSVGSFQGASPPPSYLELPGYPRTIF
KNAPSDNYLCGICNQVARWPVQTDCACGLFCHGCLQRYIGDETGTLECPRCQETFPVNEI
QRDKVAHKKLLKLDIECPHGCGTEMLLRDLDKHEEECQFVIIECINKQQGCKALIKRIDL
VNHLEKQCDFRKVSCQHCRNQFLARELEEHEKDCAFTESVTKVLTDKGADEETEAATGKL
VTHDLMKTVAIKLEAKIAEVRRMMTEIENQGKVLKSLFEDSRVSINRNQDALVDVDKSVK
QLQKMVLTKLSKLPDMERSIGASLSRTEFETHKDSIHEMRDDVDRQNTRLSTLEEQSKSG
VLGSTEGVPKHLKDKIANNTERVQYFDEQISMYSMRLAEHELRFQFQETASYDGTLIWKI
KEFARRKRDADNGKTLSLYSQPFYTSRFGYKMCARIYLNGDGIGKGTHVSLFFVVMKGDY
DALIPWPFSQKVTLMLLDQETGRRHLSDSFRPDPTSTSFQRPSTNMNIASGCPLFVSQSV
LKDPAYVKEDTIFIKVVVDTTDLYGP
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttaaagatggagcgactccaatagacattaaacctatacattttgaatgttta
attatcaacgtaacaattctgactttcataatcccaagtgcattcaatctaaagtcacac
ttaaatcatcaagttcaacctaaacgcacttctacatttaatttcaaaatcaataagtca
agacagggatttttatcaagcagcatggcagagaagggaagcgaggttatccccagcatc
aaaagcttgcagagtgacaccggagaatcagaagctcaacctggttccgttggatcgttt
caaggggcatcaccacctccgtcatatctggaattgccaggatacccccgaactatcttt
aaaaatgccccatcagacaattatctttgtggaatttgcaaccaggtagcacggtggcca
gtacagacagactgtgcatgtggattattttgtcatggatgtttacaaagatatataggt
gatgaaacaggaacactcgagtgtcccagatgtcaagagacatttccagttaatgagata
cagagagacaaagttgcccataaaaaattactgaagttagatatagaatgccctcatggg
tgtggaacggagatgctattaagagacttggacaagcatgaagaagaatgtcaatttgtg
ataatagagtgcattaataaacaacaaggatgcaaagcacttattaagaggattgatcta
gtaaaccacctagaaaagcaatgtgactttcggaaagtatcttgtcaacactgtaggaat
cagtttctcgctcgagagttagaggaacatgaaaaggattgtgcatttacagagtctgta
acaaaagtattaacggacaaaggcgcagatgaagaaacggaagccgcaacaggaaaacta
gtcactcatgaccttatgaagacagtggcaatcaaacttgaagccaagattgctgaagtc
aggagaatgatgactgaaattgagaatcagggaaaagtcctcaagagtttgtttgaggat
agtagggtgtccattaataggaaccaggatgcattagttgatgttgataagtccgttaag
caactacagaaaatggtgctaacaaaattaagcaaactgccagacatggagcggagcatt
ggggccagtttatctcggacagagtttgagacccacaaagattctatccatgagatgaga
gatgatgtagatcgtcaaaataccagactcagcacactggaagaacaaagtaaaagtgga
gtacttggatccactgagggagtacctaaacatctcaaggataaaatagcaaataataca
gaaagggtgcagtactttgatgaacaaatcagcatgtactcgatgcgtcttgccgagcat
gagctccggtttcagttccaggagactgctagctacgacggcacactcatctggaagatc
aaggagtttgcccgtcggaagcgggatgcagacaatggaaagaccctaagcctatacagc
cagcccttctacaccagtcgctttggatacaagatgtgtgccaggatatatttaaatggt
gacggtattgggaagggtacccatgtatccctcttctttgttgttatgaagggtgactat
gatgctttgataccctggccgtttagtcagaaggtgacattaatgctgttagaccaagag
accggtaggcgtcatctatctgattccttcagaccggacccaacatcgacaagcttccaa
cgtccctctaccaacatgaatattgcctcaggatgtcccttattcgtctctcaatcggtc
ctcaaagatccagcctatgtcaaggaggataccattttcatcaaggttgtcgtggataca
actgatctctacggcccttaa
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