Lytechinus pictus (painted urchin): 129267741
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Entry
129267741 CDS
T09066
Name
(RefSeq) TNF receptor-associated factor 6-A-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04120
Ubiquitin mediated proteolysis
lpic04140
Autophagy - animal
lpic04144
Endocytosis
lpic04517
IgSF CAM signaling
lpic04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129267741
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129267741
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129267741
04140 Autophagy - animal
129267741
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129267741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpic04131
]
129267741
04121 Ubiquitin system [BR:
lpic04121
]
129267741
Enzymes [BR:
lpic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129267741
Membrane trafficking [BR:
lpic04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
129267741
Ubiquitin system [BR:
lpic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
129267741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
Sina_ZnF
zf-TRAF_2
APG6_N
DUF4795
Ccdc27
Spc24
GAS
zf_C2H2_13
Motif
Other DBs
NCBI-GeneID:
129267741
NCBI-ProteinID:
XP_054761344
LinkDB
All DBs
Position
9:22314760..22336726
Genome browser
AA seq
486 aa
AA seq
DB search
MITHYLLEPGDGTKAMGTTEFSNRQLFRDLCSKREILDLQAQCPFKDCPEIVELRDMENH
VETCRFRTEPCPNQCGSSMRRKSIDDHVEKDCPRRLVECQYCRSPLCFNQTERHNAECPK
RPVSCEYCHKEVLSSLLHSHHQHECSEIPVPCQFASFGCDKRLPKERMALHISESMETHL
QIMASFLQNQQTLERSTSYPGTSWRSGAMYDGRSEFATAASKLTDVHEHGARKLDPDQLG
RAQAPPSFVTSPSPLPSFGPMASGPFDPMEQIRALRNTVKDLQEKEVRMRQNFIELESKA
ERKDLEIAALRGEVNSLQIETKELREHVANGIFVWKLYKYSELRLSAERGEATVRHSEGF
YTGSCGYRLCIRVNINKSETRGILFISLFVHFMQGKYDGFLEWPFRGSITLSLIDQNDES
ELKRKNITERLVAKSNLDAFKRPRTVRNHKGFGYMEFASVESLEKDGLFIKDNTILIKVE
VHPQCN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgataacccattacctactggaaccgggtgatggtacaaaggctatgggcactacagaa
ttcagtaatcggcagttgtttcgggatctgtgttcgaagagagagatactggacctccag
gcacaatgccccttcaaggactgcccagaaattgtagaactcagggatatggagaatcat
gtggagacgtgtcggtttagaacggagccatgtccgaaccaatgcggttcttcaatgcgg
aggaaatcaatagatgatcatgttgagaaagattgtcctaggagactggtagaatgtcag
tactgtagaagcccactgtgctttaatcaaacagagaggcataatgcggagtgtccaaag
cgaccggtcagctgcgagtattgtcataaggaggtgttatccagtcttcttcattctcat
catcagcatgaatgcagcgagattcctgtaccttgccaatttgcatccttcggctgtgat
aaaaggttacccaaagaacgcatggcgttacacatttctgaatccatggaaacccatctt
cagatcatggcctcgtttcttcagaaccaacagacacttgaacgatccactagctaccct
ggaacaagctggagatcgggtgcaatgtacgacggtcggagtgaattcgccacagcggca
agtaagctcacggatgttcatgaacacggtgctaggaagcttgaccctgatcagcttggg
agggcacaagccccgccttcctttgtgacatcaccgtctccgctgcctagctttggcccg
atggcgtctggtccctttgatccgatggagcagatcagggccttgaggaacactgtcaaa
gacctccaggaaaaggaagtaaggatgagacaaaactttattgagctcgagagcaaggca
gagcgtaaggacttggagatagccgctctccgaggtgaggtcaatagtctgcagattgag
accaaggagcttcgcgagcatgtcgcgaatgggattttcgtgtggaaattgtacaagtac
tcggaactgcgtctgtcagcggaacgaggagaagcaacggtcagacatagcgaagggttc
tacacaggttcttgcggatatcgcctttgtatacgtgttaatataaacaaatcagagact
aggggaattctgtttatatcgctctttgtgcacttcatgcaagggaagtacgatggcttc
ttggaatggcccttcaggggatcaataacgctctctctgatcgaccaaaacgatgaatcg
gaactgaaacggaagaacatcacagagagattggttgcgaagagcaacctggatgcgttt
aagagaccaaggacggttcgcaatcataagggattcggctacatggagttcgcttctgtt
gagtctctggaaaaggacgggttgttcatcaaagacaatacgattctgatcaaagttgag
gttcatccacagtgtaattag
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