Lytechinus pictus (painted urchin): 129267741
Help
Entry
129267741 CDS
T09066
Name
(RefSeq) TNF receptor-associated factor 6-A-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic04120
Ubiquitin mediated proteolysis
lpic04140
Autophagy - animal
lpic04144
Endocytosis
lpic04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129267741
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129267741
04140 Autophagy - animal
129267741
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129267741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpic04131
]
129267741
04121 Ubiquitin system [BR:
lpic04121
]
129267741
Enzymes [BR:
lpic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129267741
Membrane trafficking [BR:
lpic04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
129267741
Ubiquitin system [BR:
lpic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
129267741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
Sina_ZnF
zf-TRAF_2
APG6_N
DUF4795
Spc24
GAS
Fez1
Motif
Other DBs
NCBI-GeneID:
129267741
NCBI-ProteinID:
XP_054761344
LinkDB
All DBs
Position
9:22314760..22336726
Genome browser
AA seq
486 aa
AA seq
DB search
MITHYLLEPGDGTKAMGTTEFSNRQLFRDLCSKREILDLQAQCPFKDCPEIVELRDMENH
VETCRFRTEPCPNQCGSSMRRKSIDDHVEKDCPRRLVECQYCRSPLCFNQTERHNAECPK
RPVSCEYCHKEVLSSLLHSHHQHECSEIPVPCQFASFGCDKRLPKERMALHISESMETHL
QIMASFLQNQQTLERSTSYPGTSWRSGAMYDGRSEFATAASKLTDVHEHGARKLDPDQLG
RAQAPPSFVTSPSPLPSFGPMASGPFDPMEQIRALRNTVKDLQEKEVRMRQNFIELESKA
ERKDLEIAALRGEVNSLQIETKELREHVANGIFVWKLYKYSELRLSAERGEATVRHSEGF
YTGSCGYRLCIRVNINKSETRGILFISLFVHFMQGKYDGFLEWPFRGSITLSLIDQNDES
ELKRKNITERLVAKSNLDAFKRPRTVRNHKGFGYMEFASVESLEKDGLFIKDNTILIKVE
VHPQCN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgataacccattacctactggaaccgggtgatggtacaaaggctatgggcactacagaa
ttcagtaatcggcagttgtttcgggatctgtgttcgaagagagagatactggacctccag
gcacaatgccccttcaaggactgcccagaaattgtagaactcagggatatggagaatcat
gtggagacgtgtcggtttagaacggagccatgtccgaaccaatgcggttcttcaatgcgg
aggaaatcaatagatgatcatgttgagaaagattgtcctaggagactggtagaatgtcag
tactgtagaagcccactgtgctttaatcaaacagagaggcataatgcggagtgtccaaag
cgaccggtcagctgcgagtattgtcataaggaggtgttatccagtcttcttcattctcat
catcagcatgaatgcagcgagattcctgtaccttgccaatttgcatccttcggctgtgat
aaaaggttacccaaagaacgcatggcgttacacatttctgaatccatggaaacccatctt
cagatcatggcctcgtttcttcagaaccaacagacacttgaacgatccactagctaccct
ggaacaagctggagatcgggtgcaatgtacgacggtcggagtgaattcgccacagcggca
agtaagctcacggatgttcatgaacacggtgctaggaagcttgaccctgatcagcttggg
agggcacaagccccgccttcctttgtgacatcaccgtctccgctgcctagctttggcccg
atggcgtctggtccctttgatccgatggagcagatcagggccttgaggaacactgtcaaa
gacctccaggaaaaggaagtaaggatgagacaaaactttattgagctcgagagcaaggca
gagcgtaaggacttggagatagccgctctccgaggtgaggtcaatagtctgcagattgag
accaaggagcttcgcgagcatgtcgcgaatgggattttcgtgtggaaattgtacaagtac
tcggaactgcgtctgtcagcggaacgaggagaagcaacggtcagacatagcgaagggttc
tacacaggttcttgcggatatcgcctttgtatacgtgttaatataaacaaatcagagact
aggggaattctgtttatatcgctctttgtgcacttcatgcaagggaagtacgatggcttc
ttggaatggcccttcaggggatcaataacgctctctctgatcgaccaaaacgatgaatcg
gaactgaaacggaagaacatcacagagagattggttgcgaagagcaacctggatgcgttt
aagagaccaaggacggttcgcaatcataagggattcggctacatggagttcgcttctgtt
gagtctctggaaaaggacgggttgttcatcaaagacaatacgattctgatcaaagttgag
gttcatccacagtgtaattag
DBGET
integrated database retrieval system
