Limulus polyphemus (Atlantic horseshoe crab): 106458613
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Entry
106458613 CDS
T08968
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lpol03036
]
106458613
03400 DNA repair and recombination proteins [BR:
lpol03400
]
106458613
Chromosome and associated proteins [BR:
lpol03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
106458613
DNA repair and recombination proteins [BR:
lpol03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
106458613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCHD1_S5
HATPase_c_3
SMC_hinge
HATPase_c
Big_1
Glyco_hydro2_C5
GIPC1_GH1
Motif
Other DBs
NCBI-GeneID:
106458613
NCBI-ProteinID:
XP_013773590
LinkDB
All DBs
Position
Unknown
AA seq
2028 aa
AA seq
DB search
MAKKVIYLFDRRAGDSSPVIFDITGVKTYTEFKRRVATTFDIAENENFVICTLNRENICD
DSSFDTALRNDVSSITVLQEINQDLPAPTEEKIEYLPHYDTLLKSGMYEYYASAGQDPLP
YALAELIDNSLMATAHNKGCRKIELRLHLDPIPVIFVIDNGCGMTASQLKDWAVYRLSKF
HRKENSKQYSPKSQENFDVEIPRSLNSEISYFGVGGKQAIFYLGQRTRMITKPRNSKDVH
EFSMSQDDFEKKEQSKASVYSGLILSRRAGDASHISPEEEYIRKVILEEVGEESFTCVVI
QEIVPDHVTYLKQNYENLCRELAHTYHYYIHGPKGNILTPDKGQKLPSKFKITDIEVKMY
SKGHQSPKVTNLRDVIDDLETQFIRTAASCFEFRGLMNGKRVVEGLLRYHPFLYDHETYP
YDPYALPQPEDENDSIMADTRPGRGNRPMFECFWNGRLIPYTTIDELPWCATPKKVKDVP
VECYNRVSGVLWTDDSVHVTTNKQTFIDLERQLLDKNTNFVHVVDGQLKRGVISKEFQEW
LKTCNEQYDKQVMFRNFHGYTSRSDVQKHKQYPWAMFYAIEWDGRVYKKGQLVRTQRTNP
IIIGKIEKFLLFGEHSEDVFATGGDMEIKQEPSYLYSESKIYPLAKLDRKIGEEGIKKII
SDEEEKLPDKLTISWPEGNEVKNAEKIPVGKLIGPIKAEVLNKRGESISKLPGSTCNQKK
LLVELQVLWHSQKKDVVLAHHIGQHAKNWPYWFLKMDVIQNLGPHTLSLQVMLNGDTTLG
SRKELPSYKIRFTVIEAEPEKFTVGLLDGPFRVGLPFQIPLEFYDKFGNPTKPKADLKPQ
IEAVGVELKYEDLQVKGNSLIIKGIKAKGTVENSSGKSFQLAVKIPTLEEPIQTLKIRLH
PGVPEKLKISPKSLEIENGSSPSFEVMTVDAADNITSESRLAVECTFHGPPDSSLPVYST
DLSAGGKGVITGPPLHLNLVDAKKSIRLKARFCVPDHRLISVVEGEVLVNPSHHAASLVV
GYRGPNKNFIYIERDKDISWVAGQSVSGLEYRILDEAGREIDITPKLAGNMKVNWTKSVS
SDILLEGKLPDIQTPQSIKQLLYCNVTLSDNHVIDFPFTIKPRHGEPAYLKATCSGTSKV
RIGEALQADILVTVADKYGNAVKKVPFKSLATLAITAEGLDYSSLEKALGQSGGFVFKGL
KFSDGQLGSREVCVQWNNLKDYFRLEIVAGPPAKIIYPGFDTSQIYIVYNDSRLPSKFVV
QLCDSCGNPTPEENVKIMLGLDTDLKITPTTTVQKTDKNGQADFGILTVAVRGSQKPGKC
PLSQCSQKCRGVFSICAKGSCGRVPITGPLLKIHMPCNLLKPVEIKVDYDQSKELVPGME
FPVFSVHLITEDGGIYMPGKASQICMKLWQTRKTRGKSPVKPVTLMPSDPSPQDDPGMFY
FRNKLVPKVADSYSLQFIYDGGSNVLASQVIPIVVPPGLPVKLVPREDPGIPTVTNTQKP
NSRLVVKHLVLELRDEHDNLVSAYCKGTLNVQITNFGSSQEEIPKLAGNVTSIQVPFDKG
QAILENLMIQEKSPGIDGKEYIIRCTAVIDKLSLEYPISPYDVYFLFYNDIQKQAQMANL
AKEHDSLVYKINTYKSLFDTTQQYLKELEAVVQSSANEENKIRNQLQLLGDNLQGLNSSS
QIMAAINKCKAAKEQLEQQSRRECKLHRFPPEPGVLGKIGHLAWVSNVQVARVLAWHMQG
DMDCLVTLSKEKALEIHRRTAGQQQLLPLDSVFKRNLPDWNRPLPHVRIKSYNPPGNPLF
ARQFLVFGENEDICRIVFGMLLGDAIILDTLEDAVSYRDTFIKNNISCPTLLTKTGERIR
NNGKFGGASNKAPPMENLVNGVFGEPPLKDLEKVDEKLELLQSLKNAVDVHQQAKKDYFE
QQKQESSSEMVKKVRDYQITESRLRAIEEKLGMLPSKDKLSTPETPESQIRKGNFKNTAR
ESTRRNTDRISTRSRSSSPHGHSSNSSGQKRRSATIAVNVTKIKRQKT
NT seq
6087 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaagtgatttatttgtttgacagaagagcaggggattcttccccggtgatt
ttcgatatcacaggtgtcaaaacatatacagagttcaaaagaagggttgctaccacattt
gatatagcagaaaatgagaattttgtcatttgcactctcaatcgagaaaacatttgtgat
gactcttcatttgatactgctctcaggaacgatgtgagcagtataactgtgctccaggaa
attaatcaggatctaccagctccaacggaagagaaaattgaatacctgcctcattatgac
acacttcttaagagtggaatgtacgaatactatgcatctgctgggcaggatccactccca
tatgctttagcagaattgattgacaactctctcatggcaacagctcacaataaaggttgt
agaaagatagagctgagactgcatttggatccaattccagtgatctttgtcatagacaat
ggatgtggaatgacagccagtcagttgaaagattgggcagtgtacagattgtccaagttc
catcggaaagaaaactctaagcaatattctccaaagagccaggaaaattttgatgttgag
attccacgttccttaaacagtgaaatatcttactttggagttggagggaaacaagctata
ttttacttaggacaaagaacacgaatgatcacaaaacccagaaattccaaagatgtccat
gagttttcaatgtcccaagatgattttgagaaaaaagagcagagtaaagcatcagtgtac
agtggtctgattttgagtagaagggctggtgatgctagtcacatttctcctgaagaagaa
tacatacggaaagtaatattggaagaagtgggagaggagagttttacctgtgttgtgata
caagagattgtgcccgatcatgtcacttacttgaagcagaactatgaaaatttgtgtaga
gagttagcgcatacatatcattactatattcatggaccgaaaggaaatattttaacacct
gacaaaggacaaaaacttccctccaaatttaaaattactgacatagaggtcaaaatgtat
tcaaaaggtcatcagtcaccaaaagtaacaaatcttagggatgtaattgatgacctggag
actcagtttattagaacagctgcaagctgctttgagttccgaggcttgatgaatggtaaa
cgagtcgtagaaggccttctcagataccacccatttttatacgaccatgagacatatcct
tacgatccgtatgcacttcctcaaccagaggacgaaaatgattctattatggctgatacg
agaccaggaagaggaaaccgacccatgtttgaatgcttttggaatggcagactcatacca
tatacaactattgatgaacttccatggtgtgctactccaaaaaaagtaaaagacgttcca
gtagaatgttataacagagtgtctggagtgctttggactgatgacagtgttcatgtaacc
acaaataaacagacattcattgatttggagagacaactgttggacaagaataccaatttt
gttcacgtggttgatggccaattaaaaagaggggtaatttcaaaggaattccaagagtgg
ttgaagacttgcaacgaacagtatgacaagcaggtgatgttccgaaactttcatggatac
acctctcgttctgatgttcagaaacacaagcaatatccatgggcaatgttttatgccatt
gagtgggatggcagagtgtataagaaaggacaactagtgcgtacacaaagaacaaatcct
attatcattggaaaaatcgaaaaatttctcttgtttggagaacacagtgaagatgtgttt
gcaacagggggagacatggaaatcaaacaggaaccatcctatctttacagtgaaagtaaa
atttatcctttggccaagctagacaggaagattggagaagagggtattaagaaaattata
tctgatgaagaggaaaagttacctgacaaactaactatttcatggcctgaaggaaatgaa
gtgaagaatgcagaaaagataccagtagggaaactcataggtcctatcaaagcagaagta
ttaaacaaacgtggagaatcaatcagtaaacttccaggatcaacctgtaatcagaaaaaa
ctacttgttgaactgcaggtgctatggcattctcagaagaaggatgttgttctagctcat
catatcggccagcatgctaagaactggccttactggttcctaaaaatggatgtcatccaa
aacctgggtccgcataccctgtctttacaagtcatgctgaatggagatactacccttggg
tcaagaaaggagcttccctcttataaaatcaggtttactgtaatagaggctgaaccagaa
aaatttacagttggtctattagatggcccatttcgtgtaggtcttcctttccagatacca
ttagaattctatgataagtttggtaacccaacgaaacctaaagcagatctaaaacctcag
attgaagctgttggtgtggaacttaagtatgaagatttacaagtcaagggtaactccctc
atcataaaaggaataaaagcaaagggaacagtggaaaattctagtggaaagagctttcag
ctcgctgtgaaaattcctaccttggaagagccgatacaaaccttaaaaattcggctgcat
ccaggagttcctgagaaactgaagatatcccccaagtctcttgaaatagagaatgggtct
tctccttcatttgaagtgatgactgtagatgctgcagacaatatcactagtgagtctcgg
cttgctgtggagtgtactttccatggccctcctgattccagtctacctgtgtacagtact
gatctatctgctggaggaaaaggtgttatcacaggaccacctctccatttaaacctcgtg
gatgccaaaaaaagcattcggttaaaagcaagattttgtgttccagatcacagattgata
agtgttgtagaaggtgaggttttggttaatcctagtcatcatgctgccagtctggtagta
ggctaccgtggtcctaataagaactttatatatatagagcgagataaggacatttcatgg
gttgcagggcaatctgtttctggacttgaatatcgtattctggatgaagctggtagagag
attgatataacgcctaaactagctggaaacatgaaggtcaactggactaagagtgtatca
agtgatattcttttagaggggaagttacctgatatacagacacctcagtcaattaagcag
ttgctctactgtaatgtgacattgtcagataatcatgtgattgacttccctttcaccata
aaaccaagacacggtgagccagcctaccttaaagctacgtgcagtggtacaagcaaagtc
cgtattggtgaagctcttcaggccgatatcctagtcacagtggcagacaagtatggaaat
gcagtgaaaaaggtacctttcaagtctcttgccaccttggccatcacagctgaagggctt
gattacagctcattagaaaaagctcttgggcagtctggtggctttgttttcaaagggttg
aagttttctgatggacagcttggtagtcgtgaagtgtgtgtacagtggaacaatcttaaa
gactactttcgactggaaattgttgctggacccccagcaaagattatatatccagggttt
gatacaagtcagatttacattgtttataatgactcaagacttccgagtaagtttgtggtt
cagctctgtgattcctgtggaaatcccactccagaagaaaatgtaaaaattatgcttggg
ttggatacggatttaaagatcactccaacaacaactgtacaaaaaactgataaaaatgga
caagcagactttggtatacttacagttgcagttcgtggaagtcagaagccaggaaagtgc
cccctttctcagtgctcacagaaatgccgtggagttttctcaatctgcgcaaagggttcc
tgtgggcgtgtaccaatcactggcccattattaaagattcacatgccttgtaacttattg
aagcctgtagagataaaagtggactacgaccaaagtaaagaacttgttcctggaatggaa
tttccagtgttttcagttcatctgataacagaagatggcggtatctatatgcccgggaaa
gcatctcaaatctgtatgaagctttggcaaacaagaaagacccgtggaaaatcacctgtt
aagccagttacactcatgccatctgatcctagcccacaggatgatcctgggatgttttat
tttagaaataaattggttcccaaagttgcagattcgtacagtttacagttcatctatgat
ggaggttctaacgttctagcgagtcaagttattccaattgttgtaccacctggtcttcca
gtaaaacttgtccctcgagaagatccaggcataccaactgtgaccaatacacaaaagcct
aactctaggcttgtagtgaagcaccttgtgttagaactaagagacgagcatgataatttg
gtgtctgcttattgtaaaggtacacttaatgtccagattacaaattttggttcctcccag
gaagaaattccaaagttagcagggaatgtcacttcgatccaagttccttttgataaaggt
caagctatcctagagaatttgatgatacaggaaaaaagcccaggcatagatgggaaagag
tatataatacgatgtacagctgtgatagacaagttatcattagaataccccatttctcct
tatgatgtgtacttcctcttctataatgatattcagaagcaggcacagatggctaattta
gctaaagagcacgattctctagtctataaaataaatacgtacaagtctctcttcgataca
actcagcaatatttaaaagagctagaagctgtggtgcaaagttctgctaacgaagaaaac
aagatacgtaatcagttgcagttgcttggagataacttacaaggtttaaacagtagttcc
caaattatggctgcaattaataagtgcaaagcagctaaggaacaactggagcagcagtca
agaagagaatgtaaactacatcgatttcctccagagccaggagttctgggaaaaataggc
catctagcttgggtcagtaatgtacaggtagcccgagttctggcatggcacatgcaagga
gacatggattgtctagtcacattatctaaagagaaggcactagaaattcatcgcagaaca
gcaggacaacaacagcttctcccattagactctgtcttcaaaagaaacttaccagactgg
aataggccattgccacatgtgagaataaaatcttacaacccacctggaaaccctcttttt
gcaagacagtttttagtttttggagaaaatgaagatatctgtagaattgtatttggaatg
ttgctaggggatgcaatcatcctggatacactggaggatgcagtcagctatcgagatacg
tttataaagaacaacatcagctgtccaactttacttacaaaaacgggagaacgtattagg
aataatggaaaatttggaggggctagtaacaaagcccctcccatggagaatctggtaaat
ggagtgtttggagaaccaccccttaaagatttggagaaagtggatgaaaagttggaactt
ctgcagtccttgaagaatgctgtagatgttcaccagcaagctaagaaagattattttgag
caacagaaacaagagagttcttctgaaatggtgaagaaagtgcgtgactatcagatcact
gagagcaggcttcgagcaattgaagaaaaacttggtatgctgccttccaaagacaaatta
tcaactccagaaactcctgagtcacagatcagaaaaggaaattttaagaacacagctcga
gaatcaactcggcgcaacactgatagaatttccactcgaagtcgtagctccagtcctcat
ggtcattcttctaactcatctgggcagaaacgtagaagtgcgactattgctgttaatgtc
acaaaaataaaacgtcagaaaacatga
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