Limulus polyphemus (Atlantic horseshoe crab): 106465512
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Entry
106465512 CDS
T08968
Name
(RefSeq) LOW QUALITY PROTEIN: 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106465512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpol03041
]
106465512
Spliceosome [BR:
lpol03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106465512
Complex C
U5 SnRNP specific factors
106465512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Roc
MMR_HSR1
Ras
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
106465512
NCBI-ProteinID:
XP_013781192
UniProt:
A0ABM1BFW7
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MDADLYDEFGNYIGPEIDSGSEDEDGYDRENDNEQEYHEDDTMDESRDEEEGPQMQIILH
EDKKYYPTAEEVYGQDVETIVQEEDTQALTEPIIAPVKKKKFSHVEQDFPNTVYNLEFLA
DLMDNTDLIRNIALVGHLHHGKTSFVDCLIEQTHPDLCVKEGKNLRYTDTLYTEQERGVS
IKATPVTLVMQDLKGKSYLMNIFDTPGHVNFSDEVTAAMRLCDGVVIFVDAAEGVSLNTE
RLVKHAVQERMAITLCINKIDRLVLELKLPPQDAYYKLRHIIEEINGLLSLYSDENDQPT
VSPLSGNVCFASSQYSVCFTLRSFAQLYAQTYGNINPFDFARRLWGDIYFNSKTRKFTKK
PPHSSALRSFVEFILEPLYKLFAQVXFNVIFXPNLKIDXXVKVSKINLNXNETSNLFVLL
LRLICSRFLGDFNGLTDMCVQHVPSPAENSKKKIEHIYTGPQDSELSEAMVECDPDGPLM
VHTTKQYSTQDATSFHIFGRVMSGTLHANQEVHILGENYTLMDEEDSRVVTVGRLWIYEA
RYKIEVDRVPAGNWVLIEGIDQPIVKTATICDIGTQDELYIFRPLKFNTQSVIKIAVEPV
NPSELPKMLDGLRKVNKSYPLLSTKVEESGEHVVLGTGELYLDCVMHDLRKMYSEIDIKV
ADPVVSFCETVVETSSLKCFAETPNKKNKVTMIAEPLEKGLAEDIENEVVQITWNRKRLG
EFFQTKYDWDLLAARSIWAFGPDVTGPNILVDDTLPSEVDKGLLNMVKDSIIQGFQWATR
EGPLCEEPIRNCKFKILDAVISGEPIHRGGGQIIPTARRVAYSAFLMATPRLMEPYYFVE
VQAPADCVSPVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQA
FCLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSINKFFDD
PMLLELARQDVMLNYPL
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgatttgtatgatgaatttggaaactacattggaccagaaatagatagtgga
tcagaagatgaagatggatatgatagagagaatgataatgagcaagagtatcatgaggat
gataccatggatgaaagtcgggatgaagaggagggtccacagatgcagattattttacac
gaggacaagaaatactatccaactgcagaggaagtgtatggacaagatgtggaaacaatt
gttcaggaagaagatacacaagctttgactgaacctatcattgctccagtgaaaaagaag
aaattctcccatgtggaacaggactttccaaatacagtgtacaacttagagtttctggct
gacctcatggataatacagatctcatcagaaacattgctttagtaggccatctgcaccat
ggaaagacatcctttgttgactgtttaattgaacagacccatccagacctgtgtgttaaa
gaagggaaaaatcttcgttatacagacaccttatatactgagcaagagcgaggagtcagt
atcaaagctactccagtgactcttgtgatgcaggatttaaaaggaaagtcatatttgatg
aatatttttgacactccaggccatgttaatttttctgatgaagttacagcagccatgagg
ttatgtgatggggtggtgatttttgtagatgctgcagaaggagtttcattaaatacagaa
cgtcttgttaaacatgctgtacaggagcgaatggcaataacattgtgcatcaacaaaatt
gatcggcttgttcttgagcttaaacttcctcctcaagatgcctactacaagctacgtcac
ataattgaggaaattaatggtcttttaagtttgtattcagatgaaaatgaccagcctact
gtgtctcctttgtcaggaaatgtgtgttttgctagttctcaatacagtgtgtgttttacc
ctacgctccttcgctcaactttatgcgcagacatatggcaacatcaatccttttgatttt
gctcggcgcctctggggagatatctattttaacagtaaaacaaggaaattcaccaaaaag
ccacctcatagttcagcattaaggagttttgttgagtttattttggaaccactgtacaag
ttatttgctcaggtttgatttaatgtaattttttagcctaatttaaaaatagattaatag
gttaaagttagtaaaattaatctaaactgaaatgaaacctctaacctattcgtcctactt
ctccgtttgatatgttctcgtttccttggagattttaatggtttaacggacatgtgtgtc
caacatgtaccatctcctgctgagaattcaaaaaagaaaattgaacacatttatactggt
cctcaagattctgagttatctgaagccatggtggaatgtgatcctgacggaccactgatg
gttcacaccaccaaacagtactctacccaagatgctactagttttcacatttttggacgg
gtgatgagtggaactctacatgctaaccaagaagtgcacattttgggtgaaaactacact
ttgatggatgaagaagattctcgggttgtcactgtgggaaggctgtggatatatgaggcc
agatataaaattgaagtcgatcgagtaccagctggaaactgggtgctcattgaaggaatt
gatcaaccgattgtaaagactgctactatttgtgacattggaactcaagatgaactgtac
atatttcgaccattaaaattcaacacacaatctgtaattaaaattgctgtggagcctgtc
aacccatctgaacttccaaagatgttagatggcttgcgaaaggttaacaaatcctaccca
ttacttagtaccaaggtggaagaatcaggtgaacatgttgttttgggaacaggagaactg
tacttggactgtgtcatgcatgacttgagaaagatgtactcagaaatagatatcaaggtg
gctgatccagttgtctctttctgtgagacagttgtagaaacatcttcactgaaatgtttt
gcagagacaccaaataaaaagaacaaagtaactatgatagcagaaccattagaaaagggt
ctagcagaggatattgaaaatgaggtagttcaaattacatggaatcgtaaacgacttgga
gagttctttcagacaaagtatgactgggacttgctagctgctcgatctatctgggcattt
ggcccagatgttacgggacctaatattttagtggatgatactctcccatctgaggttgac
aaaggattattaaacatggtgaaagacagtattatccagggcttccaatgggctacccgg
gaagggccattgtgtgaagaacctatccgaaactgcaaatttaagatcctagatgctgtt
atatcaggagaacccatccatcgaggtggtggacagatcatccccactgctcgtagggtt
gcttattctgcttttcttatggccactccacgtctgatggaaccatactattttgtggaa
gttcaagctccagctgattgtgtatcaccagtgtacactgttctagcaagaagaagagga
catgtgacccaagatgctccagttccaggttcacctctttacacaatcaaagcctttatt
ccagctattgactcctttggttttgagacagatcttcgtacccatacacaaggccaagca
ttttgtttgtctgtcttccatcattggcagattgttcctggtgatcctctggacaaaagt
atagtcatcagaccgctcgaacctcagcctgctccacatcttgctcgagagttcatgatt
aaaactcgtagaagaaagggtcttagtgaagatgttagcatcaacaaattctttgatgac
cctatgttgctggagttagcaagacaagatgtcatgttaaactatccattatga
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