Lonsdalea populi: I6N93_05975
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Entry
I6N93_05975 CDS
T06954
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lpop
Lonsdalea populi
Pathway
lpop01501
beta-Lactam resistance
lpop01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I6N93_05975
01503 Cationic antimicrobial peptide (CAMP) resistance
I6N93_05975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lpop03036
]
I6N93_05975
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpop02000
]
I6N93_05975
01504 Antimicrobial resistance genes [BR:
lpop01504
]
I6N93_05975
Chromosome and associated proteins [BR:
lpop03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
I6N93_05975
Transporters [BR:
lpop02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
I6N93_05975
Antimicrobial resistance genes [BR:
lpop01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
I6N93_05975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CusB_dom_1
HlyD_D23
HlyD_3
Biotin_lipoyl_2
DUF7507
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
QPQ25324
LinkDB
All DBs
Position
complement(1344168..1345289)
Genome browser
AA seq
373 aa
AA seq
DB search
MQLRMLCLLTLLGLSGCDDSQTQTESATPTEVGVVTLKPTTFTLESELTGRTAATLTSDV
IPQVGGLIQNRLFTEGDEVKAGQPLYQIDPSSYKATYDQAAAALQSAKALVLSDCLKAKR
YAGLVKEQGVSQQDADDARSTCEQDKASVLEKNAALESARINLQWTTVTAPIDGRIGISS
VTPGALVTAQQTTALTTIRALDTMYLDLTRSSADLLRLRKQALATNSDTLSVTLTLEDGT
VYPHKGRLALTEVAVDESTGSVTLRSVFPNPDHVLLPGMFVRAKVDEGVMQDAILAPQQG
ITRDVKGNATALVVAADNKIERRAVVTGQATGSSWLITSGLKSGDRLLVEGSDKVAPGST
VNPVEVQLTGGAN
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcaattacgcatgttatgccttttgacattactaggtttgagcggttgcgacgacagt
caaacgcaaaccgaaagcgccacgccgaccgaagtgggcgtcgtgacgttaaaacccacc
acatttacgctggaaagcgaattaaccggccgcaccgccgccacgctgacgtctgacgtc
atccctcaggtcggcggccttattcaaaatcgtctgtttaccgaaggcgatgaggtaaaa
gccggtcagccgctgtatcagatagacccatccagctataaggcgacctacgaccaggcc
gccgccgcgttgcagagcgccaaagccctggtcttgtccgactgtcttaaggccaaacgc
tacgccggactggtcaaagaacagggcgtgtcgcagcaggatgcggacgatgcccgctcc
acctgtgagcaagacaaggccagcgtactggaaaaaaatgccgcgctggaaagcgcccgt
atcaacctgcagtggacgaccgtcactgcgcccatcgacggccgcatcggtatttccagc
gtcacgccgggggcgctggtcaccgcgcagcagaccaccgcgctcaccaccattcgtgcg
ctggacaccatgtatctcgatctgacccgttccagcgccgatcttctgcgcctgcgcaaa
caggcgctggcgaccaacagcgatacgctcagcgtcaccctgacactggaagacggtacg
gtctatccgcataaagggcgactggcgctgacggaagtcgccgtcgacgaatccaccggg
tccgtcacgctgcgttccgtgttccctaaccccgaccatgtgctgcttcccggcatgttc
gtccgtgcgaaagtggatgaaggcgtgatgcaggatgcgatactggcgccgcagcagggc
attacccgcgacgtgaaaggcaacgcgacggcactggtcgtcgcggccgacaataagata
gaacgccgcgccgtcgtcacggggcaggccaccggcagcagttggttgattaccagcggc
ctgaagagcggcgatcgcctgctggtcgaaggcagcgacaaagtcgcgccaggcagtacg
gtcaaccccgtcgaagttcaactaacgggaggcgctaactga
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