Lonsdalea populi: I6N93_09305
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Entry
I6N93_09305 CDS
T06954
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
lpop
Lonsdalea populi
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpop03009
]
I6N93_09305 (rlmC)
Enzymes [BR:
lpop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
I6N93_09305 (rlmC)
Ribosome biogenesis [BR:
lpop03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
I6N93_09305 (rlmC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Methyltransf_12
Cons_hypoth95
Methyltransf_ANTKMT
Methyltransf_11
UPF0020
Motif
Other DBs
NCBI-ProteinID:
QPQ25863
LinkDB
All DBs
Position
complement(2121281..2122411)
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AA seq
376 aa
AA seq
DB search
MHCARYNDGTCRSCQWLEKEYPQQLEDKQQHLNGLLADHPVRQWLPAYPSPHSAFRNKAK
MVVSGSVERPMLGVLHRDGTPVDLCDCPLYPDSFQPVFTVLKTFIARAGLTPYQVARRRG
ELKYLLLTESRLNGHFMLRFVLRSETKLNQLRAVLPWLQEQLPQLAVISANIQPVHQAIM
EGEQEIPLSRQQVLEEAFNQIPLAIRPRSFFQTNPDVAASLYDTARRWVQALPVRSLWDL
FCGVGGFGLHCATPAMALTGIEISAEAIACARRSAEQLGLKKVHFEALDSTRFATGEGAM
PDLVIVNPPRRGIGDDLCQYLSRMAPPYILYSSCNAQSMAKDMSLLPGYRAEHIQLFDMF
PHTAHYEVLTLLKRMA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgcccgctacaacgacggcacctgccgttcctgccaatggttggaaaaagag
tatcctcagcagttggaagacaagcagcagcacctgaacggactgctggccgaccatccg
gttcgtcagtggctgccggcatatccgtcgccgcatagcgcctttcgcaataaagccaag
atggtggtgagcggcagcgtcgaacgtccgatgttgggcgtactgcatcgcgacggcacc
cccgttgacctgtgcgactgtccgctttatcccgacagtttccaacctgtctttacggta
ctgaagacgtttatcgcgcgggcgggattaacgccttatcaggtcgcccggcggcgcggt
gagctgaaatatctgctgctgacggaaagtcggttgaacgggcattttatgctgcggttt
gttttacgctcggaaaccaaactgaaccagctgcgcgccgtcttaccgtggctgcaggaa
cagctgccgcagctggcggtgatctctgcgaatatccagcctgtgcatcaggcgatcatg
gagggggagcaagaaattccgctcagtcgtcagcaggtgctggaggaagcgtttaatcag
ataccgctcgccatccgtccgcgaagtttcttccaaaccaaccctgacgtggccgcttct
ctatacgacactgcccggcgctgggtgcaagcgctgccggtccgcagcctgtgggatcta
ttctgcggcgtgggcggcttcggacttcactgtgcgacgcctgcgatggcgctgaccggt
attgaaatcagcgccgaggctatcgcgtgcgcgcgacgctccgccgagcagctcgggctg
aagaaggttcattttgaagcgctggattcgacgcggtttgcgaccggggaaggggccatg
ccggatttagtgattgtgaacccgcctcgtcgcggtatcggggacgatctctgccaatat
ctcagccgcatggcgccgccgtacatcctgtactccagctgtaacgcccaaagcatggcg
aaggacatgtcgctcctgccaggctatcgcgccgagcacattcagctgttcgatatgttt
ccgcataccgcgcactatgaagtgctgaccttgctgaaacggatggcataa
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