Limosilactobacillus portuensis: PRK60_08405
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Entry
PRK60_08405 CDS
T08838
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lpor
Limosilactobacillus portuensis
Pathway
lpor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PRK60_08405 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpor03400
]
PRK60_08405 (nth)
Enzymes [BR:
lpor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PRK60_08405 (nth)
DNA repair and recombination proteins [BR:
lpor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PRK60_08405 (nth)
Prokaryotic type
PRK60_08405 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
DUF2400
DivIC
Motif
Other DBs
NCBI-ProteinID:
WCT60569
LinkDB
All DBs
Position
1640572..1641213
Genome browser
AA seq
213 aa
AA seq
DB search
MLTDSEIVNAIHQMRAMFPEAGTTLKADTTFHFLLATILSAQSTDKSVNMVTPPLFTRYP
TPESLAIAEPEDVEPFIQSLGLYHNKAKYLVKAARGIVTDFNSEVPHTMKELTSLASVGR
KVANVVLAECFNIPAFPVDTHVSRVARRLGMVKPNATVLQIEKRLKEAVPKDEWLDAHHA
MIFFGRYQCTAKNPKCTKCPLLPICKYGRDNVF
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgctcacagatagcgaaattgtcaacgccattcaccaaatgcgcgccatgtttcccgaa
gctggaacaacattaaaggctgatacaacttttcatttcttgttagcgacaattctcagt
gcacaatcaacggataaatcagttaatatggttaccccgccactttttacccgttaccca
acacctgaatcactagcaattgctgagcccgaagacgttgaaccgtttattcaatcgctc
ggtctctaccataataaagctaaataccttgttaaagccgctcggggaattgtgacagat
ttcaacagtgaagttccccacaccatgaaagaattaactagtttagctagtgtcggtcgt
aaagtcgctaacgttgtccttgcagaatgtttcaatattcctgcctttcccgtcgataca
catgttagtcgggttgcacgacgtttaggaatggttaaaccaaacgcaaccgttttgcag
attgaaaaacgcctaaaagaggcagtccccaaagatgaatggctcgatgctcaccacgca
atgatcttctttggtcgctaccaatgtaccgctaagaatcctaaatgtactaagtgtccc
ctcctccccatctgtaaatatggccgagataatgtcttttaa
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