Legionella pneumophila Paris (serogroup 1): lpp1020
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Entry
lpp1020 CDS
T00209
Symbol
lig
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
lpp
Legionella pneumophila Paris (serogroup 1)
Pathway
lpp03030
DNA replication
lpp03410
Base excision repair
lpp03420
Nucleotide excision repair
lpp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
lpp1020 (lig)
03410 Base excision repair
lpp1020 (lig)
03420 Nucleotide excision repair
lpp1020 (lig)
03430 Mismatch repair
lpp1020 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpp03032
]
lpp1020 (lig)
03400 DNA repair and recombination proteins [BR:
lpp03400
]
lpp1020 (lig)
Enzymes [BR:
lpp01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
lpp1020 (lig)
DNA replication proteins [BR:
lpp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
lpp1020 (lig)
DNA repair and recombination proteins [BR:
lpp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
lpp1020 (lig)
NER (nucleotide excision repair)
GGR (global genome repair) factors
lpp1020 (lig)
MMR (mismatch excision repair)
DNA ligase
lpp1020 (lig)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
lpp1020 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
Nlig-Ia
HHH
PTCB-BRCT
FeoA
DUF4796_N
Motif
Other DBs
NCBI-ProteinID:
CAH12171
Pasteur:
lpp1020
UniProt:
Q5X6E6
LinkDB
All DBs
Position
1136515..1138536
Genome browser
AA seq
673 aa
AA seq
DB search
MNDQGIKESIETLKEQIRKYDYHYYVLDEPLVPDAEYDRCFKALQQYEEQYPQFLSPDSP
TQRVSGTPSDAFMPVAHKQPMLSLSNVFTIDELKAFIKRAIEKLDEPNQQLVFACEPKLD
GLAVNMTYEGGILTHAATRGDGAVGENITANIKTIASVPLRLRVSNPPKLIEVRGEVYIP
KADFEAYNARARELGEKTFANPRNAAAGSLRQLNPEISASRPLAIYCYSIGACEDYKLPN
SHLEQLNLLKEFGFRVSPETRRAIGVEGCLDYYQYMLAKRNQLPFEIDGVVYKIDSISLQ
QQLGYVSRAPRFACAHKFPATEEMTRLIAVDFQVGRTGAVTPVARLEPVSVGGVTVSNAT
LHNFDEITRKDIRIGDTVIIRRAGDVIPEVVSVILEKRPINARKIELPKNCPVCGSEVVR
EADEAIARCIGGLYCKAQLKRMMWHFASRKAMYIEGLGSVLIDQLVDEGIVHHLADLYEL
DLQTLANLPRMGEKSAKNLLSALEKSKKTTFNRFLYALGIREIGEAGARVLAEHYCDVES
LKSATIEELMTLNDIGPVAASHVVHFFAQAHNLEVIDRLLELGIHWPKPEKIQVNQQNPF
FGKTVVLTGTLSAMGREEAKAKLLALGAKVSGSVSSKTDYVIAGSEAGSKLIKATELGVA
IIEEDEFLKWVNS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatcaaggaattaaggaatcgatagaaacgcttaaagagcaaataagaaaatac
gattatcactattatgttttagatgaacctttggttcctgacgcggaatatgatcgatgt
ttcaaggcattgcaacagtatgaagagcaatatccgcaatttttatcgccagattcccct
acacagagagtgagcggtactccttcagatgcttttatgccggtagcccataagcaaccc
atgttgtctttatccaatgtgtttactatcgatgaattaaaagcattcattaaacgagca
attgagaaactggatgaaccaaatcaacaactggtatttgcttgcgaaccaaagcttgat
gggttggctgttaacatgacttatgagggcgggatcttgactcatgccgcaactcgtggc
gatggtgctgtaggagaaaacatcacggcaaatattaagactattgcttcagttccatta
aggctaagggttagtaaccctccaaaattgatcgaagtgcggggtgaagtctatatcccc
aaagccgattttgaagcttacaacgcaagggctagagaactcggtgaaaaaacttttgct
aatccgcgaaatgctgctgcaggcagtttaagacaattaaatcctgaaatttctgccagt
cgtccacttgctatttattgttatagtataggggcttgcgaggattataagttacctaac
agtcatttggagcaattgaatttattaaaagagtttggatttagagtgtctccagaaacg
aggagggcgattggagtagaaggctgtttagattattaccagtatatgttagcgaaacgg
aatcaattgccatttgaaatcgatggggttgtttataagattgacagtatctccttgcaa
cagcaattaggttatgtttctcgtgccccaagatttgcttgtgcccataaatttcccgct
acagaagaaatgactcgtctgatagccgtggatttccaggtaggtagaacgggtgctgtg
acgccggttgcacgtttggagccagttagtgttggtggtgttacagtaagtaacgcgact
ttgcataattttgatgaaattacacgaaaagacattcgtattggtgatacggttattatt
cgtcgtgccggtgatgtgatccctgaagtagtttctgtgattttggaaaagcgtcccatt
aatgccagaaagattgagcttcctaaaaattgccctgtttgtggttctgaagtcgtaagg
gaagcggatgaagcaattgctcggtgtatcggcggtttatattgtaaagcacaattaaaa
aggatgatgtggcattttgcttctcgaaaagcgatgtatattgaaggacttggtagtgtt
ttaattgatcagttagttgatgagggtattgtccatcatttggcggatctttatgaactc
gatttgcagactttagctaacctgccaaggatgggggagaaatctgcaaaaaacttatta
tccgctttggaaaaaagtaaaaaaacgactttcaatcgctttctttatgctttggggatc
agagaaatcggtgaagctggcgcaagggttttagcggagcactactgtgatgtagagagc
ttgaaatcagcaacgattgaggaattaatgactctgaatgacataggtccagtagcggct
tctcatgtagtccatttctttgctcaagcgcataatcttgaagtgattgaccgtcttctc
gagttgggtattcattggcctaagcccgaaaaaatacaggttaatcagcaaaatccattt
tttggtaaaacagtagttttaactggaactctgagtgccatggggagggaagaggcaaag
gcaaaattattagccttaggtgcaaaagtgagtggaagtgtgtcttccaaaacggattat
gtaatagcaggaagtgaagccggttcaaagctgattaaagcgacagaactgggagtagcg
attatagaggaagacgagtttttaaaatgggttaattcatga
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