Lacticaseibacillus paracasei N1115: AF91_08630 Help Entry AF91_08630        CDS       T03050                                  Name (GenBank) DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism lpq  Lacticaseibacillus paracasei N1115 Pathway lpq03030   DNA replication lpq03410   Base excision repair lpq03420   Nucleotide excision repair lpq03430   Mismatch repair Brite KEGG Orthology (KO) [BR:lpq00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     AF91_08630    03410 Base excision repair     AF91_08630    03420 Nucleotide excision repair     AF91_08630    03430 Mismatch repair     AF91_08630  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:lpq03032]     AF91_08630    03400 DNA repair and recombination proteins [BR:lpq03400]     AF91_08630 Enzymes [BR:lpq01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      AF91_08630 DNA replication proteins [BR:lpq03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      AF91_08630 DNA repair and recombination proteins [BR:lpq03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      AF91_08630    NER (nucleotide excision repair)     GGR (global genome repair) factors      AF91_08630    MMR (mismatch excision repair)     DNA ligase      AF91_08630   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       AF91_08630 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT HHH_8 HHH_3 HHH Nlig-Ia 5_3_exonuc Zn_ribbon_NUD Motif Other DBs NCBI-ProteinID:  AHJ33251 UniProt:  A0A806LB36 LinkDB All DBs Position complement(1734409..1736433) Genome browser AA seq 674 aa AA seqDB search MLAKPAAQFTLEEAQAEVEKLRKQLNQWRLEYYTKDAPTVTDNVYDDHYRDLQALEAAYP KLVTPDSPTQEVGDVINSDFAKVQHPIPMLSMGDVFSFEELSEWDARMQSNVGHPVDYNV ELKIDGLALSLIYENGKLVQGSTRGDGNVGEDVTRNVLTIASVPKQLKQPLSLEVRGECY MPKAAFAKLNARQETEGGTPFANPRNAAAGSLRQLDAKVTAARELDTFIYTLIEPEQFNV TTQHEAIAFMQALGFTTNPSSEVAGDMQAIDTYIKKYTTDRDALPYGIDGIVLKVNDLAL QAQLGNTVKVPRWEIAYKFPPEEAETVIHDIVWTVGRTGVVTPTAVMDPVQLAGTTVARA TLHNADMIRDKDIRIGDTVMLHKAGDIIPEVSRVLVAKRPADTPPAPIPEACPSCGQKLV HLDDEVALRCINPMCPAQVQEQLTHFASRNAMNIDGLGPKIVAQLQAKHLVKDVADLYHL TAADLAKLDKFKEKSINNLLSAINNSRQNSVERLIFGLGIRHVGGKAARILAEHFGDLDH LMTASQEAIADVPNIGPTIAEAIVTYFKAATVQKLITQLREADVNLRYTGPTKPVVKDSF VAGKTVVITGKFAEFSRPALTKQLEGLGAKVTGSVSKKTDLLIAGDAAGSKLAKAQSLNV PIMNETELLANLKD NT seq 2025 nt NT seq  +upstreamnt  +downstreamnt gtgttagcaaaaccagctgcacaattcacacttgaagaagctcaggcggaagtcgaaaag cttcggaagcaactgaatcaatggcgtcttgagtattacaccaaagatgcgccaactgtg accgataacgtctatgacgatcattatcgcgatttacaggcactcgaggcggcttatccc aagctagtcacgcctgattcgccaactcaagaagtcggcgatgtcattaattcggacttt gccaaggtgcaacacccaattccgatgttgtcgatgggcgatgttttttcgttcgaagag ctgagtgaatgggatgctcgcatgcaaagcaatgtcggccatccggtggattacaatgtt gagttgaaaatcgacgggttggctttatctctgatttatgaaaacggcaaactcgttcaa ggctcaacacgtggtgatggtaatgtcggtgaagatgtgaccagaaatgtgttgaccatt gcgtcagttcccaagcagttaaagcagccactttcactcgaggtacggggtgaatgttat atgcctaaggcggcgtttgccaagctgaatgcgcggcaggaaactgagggcggcacgcct tttgccaatccacgtaacgcggcagctggatcactccgacagttagatgccaaagtcacc gctgctcgagagctggataccttcatttatacgttaattgaaccagagcagtttaacgtg accacgcagcatgaggcgattgcgtttatgcaggcacttggatttacaacaaatccaagt tcagaagtggctggtgacatgcaggcgattgacacctacattaagaagtacaccaccgac cgtgatgcgttgccttatggaattgatgggatcgttttgaaagtgaacgatttggcgctg caagcgcaactaggtaacaccgttaaagtgccacgctgggaaattgcctacaaattccca cctgaagaagcagagaccgtcattcatgacattgtctggacagttggtcgaaccggtgtg gtcacgccgactgccgtgatggacccggttcagcttgctggaaccacagtggcacgggcc acgttgcacaacgcggatatgattcgtgataaagatattcgcatcggcgacaccgtcatg ttgcacaaagcaggcgacattattcctgaagtttcgcgggtactggttgctaaacgtcca gcggatacgccaccggcgccgattccagaggcctgcccgtcatgtggccaaaaactggtc catctcgacgatgaagtagctttgcgttgcatcaacccgatgtgtccggcacaggtccaa gagcagctcacccattttgcgtctcgcaacgcgatgaatatcgatggcttaggcccgaag attgtggcacagttgcaggccaaacatctggtaaaagatgtcgctgatttgtatcacctc acagctgcggatctggcgaaattagataagtttaaagaaaaatcaattaataatttgtta agtgcgatcaacaacagtcggcaaaactcggtagaacgcttaatctttgggttgggcatt cggcacgttggcggtaaagccgcccgaattctggccgaacatttcggcgatttggatcat ctgatgaccgccagtcaagaggcgatcgcagatgtgccaaacatcgggccgaccattgcg gaagcgatcgtgacgtattttaaagccgcaacggttcaaaagttgatcactcagttgcgc gaagctgatgttaacctgcgttacaccggaccgaccaaaccagtggtcaaagatagtttt gttgcaggtaaaaccgttgtgattaccggtaagtttgccgagttttcgcggccagcactc acgaagcagctagaaggattaggagccaaggtcacaggttcagtttcaaagaaaacggac ctcctgatcgctggcgacgcggctggcagtaagttggcaaaggcacaaagcttgaatgtc ccaatcatgaatgagacggaattgctggcgaatttgaaggattga

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